TAfinder detailed results

Overview

Job ID 9mizKMmBqU
Sequence name Escherichia coli strain DH5alpha chromosome, complete genome.
Predicted type II

Orphan Antitoxin (Protein)


Predicted family TsdA (AT10117) Predicted domain -
Locus tag C1467_RS25600 Length 91 a.a.
Coordinates 3646657..3646932 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1467_RS18965 3641922..3642593 + 672 Protein_3495 PIG-L deacetylase family protein -
C1467_RS18970 3642603..3643799 + 1197 WP_000860444.1 glycosyltransferase family 2 protein -
C1467_RS18975 3643723..3643950 + 228 Protein_3497 acetyltransferase -
C1467_RS18980 3644872..3644872 - 4833066 WP_088895425.1 IS3-like element IS2 family transposase -
C1467_RS18990 3645251..3645694 + 444 WP_000012218.1 transferase -
C1467_RS18995 3645696..3646469 + 774 WP_000596084.1 YaiO family outer membrane beta-barrel protein -
C1467_RS19000 3646657..3646932 + 276 WP_001141271.1 formaldehyde-responsive transcriptional repressor FrmR Antitoxin
C1467_RS19005 3646967..3648076 + 1110 WP_000842106.1 S-(hydroxymethyl)glutathione dehydrogenase -
C1467_RS19010 3648170..3649003 + 834 WP_000419081.1 S-formylglutathione hydrolase -
C1467_RS19015 3649227..3649766 - 540 WP_001096705.1 DUF2058 domain-containing protein -
C1467_RS19020 3649868..3651079 - 1212 WP_000107627.1 3-(3-hydroxy-phenyl)propionate transporter -
C1467_RS25600 3651243..3651412 - 168 Protein_3506 hypothetical protein -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Antitoxin


No domain identified.



Sequences

Orphan Antitoxin        


Download         Length:         Molecular weight: 10317.72 Da        Isoelectric Point: 5.8893

>WP_001141271.1 Orphan_TA_85 Antitoxin
MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAAVRGAANGLMAEVLESH
IRETFDRNDCYSREVSQSVDDTIELVRAYLK*

Download         Length: 276 bp

>WP_001141271.1 Orphan_TA_85 Antitoxin
ATGCCCAGTACTCCGGAAGAGAAGAAAAAGGTCCTTACTCGAGTTCGTCGTATTCGGGGG
CAGATTGATGCTCTGGAACGGTCGCTGGAGGGTGATGCCGAATGCCGTGCCATACTCCAA
CAGATCGCTGCCGTTCGGGGCGCGGCTAATGGGCTGATGGCAGAAGTGCTTGAAAGCCAT
ATCCGGGAAACGTTTGACCGAAATGACTGCTACAGCCGCGAAGTCAGCCAATCCGTTGAC
GACACTATTGAACTGGTTCGTGCCTATCTTAAATAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
AT10117 Staphylococcus aureus subsp. aureus N315

34.286

72.165

0.261