TAfinder detailed results
Overview
| Job ID | 9mizKMmBqU | ||
| Sequence name | Escherichia coli strain DH5alpha chromosome, complete genome. | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | parE (T228) | Predicted domain | - |
| Locus tag | C1467_RS25265 | Length | 280 a.a. |
| Coordinates | 265759..266601 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1467_RS01305 | 260885..261181 | + | 297 | WP_001175589.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| C1467_RS01310 | 261309..261749 | - | 441 | WP_000065778.1 | glutaredoxin-dependent arsenate reductase | - |
| C1467_RS01315 | 261762..263051 | - | 1290 | WP_001324556.1 | arsenite/antimonite:H(+) antiporter ArsB | - |
| C1467_RS01320 | 263105..263458 | - | 354 | WP_000008957.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| C1467_RS01330 | 264198..264281 | + | 84 | WP_001295215.1 | damage-inducible type I toxin DinQ | - |
| C1467_RS01335 | 264335..265687 | - | 1353 | WP_000160808.1 | glutathione-disulfide reductase | - |
| C1467_RS01340 | 265759..266601 | - | 843 | WP_000954225.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase | Toxin |
| C1467_RS01345 | 266804..268846 | + | 2043 | WP_000184155.1 | oligopeptidase A | - |
| C1467_RS01350 | 268854..269606 | + | 753 | WP_000686608.1 | 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ | - |
| C1467_RS01355 | 269655..271124 | - | 1470 | WP_001098647.1 | dipeptide/tripeptide permease DtpB | - |
| C1467_RS25265 | 271290..271343 | + | 54 | WP_212591402.1 | hypothetical protein | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 31944.62 Da Isoelectric Point: 8.9498
>WP_000954225.1 Orphan_TA_6 Toxin
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE
YLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELH
PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI
AEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE*
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE
YLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELH
PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI
AEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE*
Download Length: 843 bp
>WP_000954225.1 Orphan_TA_6 Toxin
TTACTCCGGCACGATCCAGCTTACGGTGGCGTGCCCGGTGCCTGCCGGAACCAGTTTGCT
GTGCAGCCACGGCAGCACGTTATTCATCTGCTGTTCCAGTTTCCACGGCGGGTTAATCAC
AATCATGCCGGAAGCGGTCATGCCACGGCGATCGCTGTCTGGCAGTACCGCCAGTTCAAT
TTGCAGAATTTTGCGAATACCGGTCGCTTCCAGATCGTGGATCATGCGCTTAATTTGCTG
ACGCAGCACCACCGGATACCACAGTGCGTAAGTACCAGTGGCGAAACGTTTGTAACCTTC
TGCTATCCCGCTGACCACCGCCTGATAGTCGGTTTTCATTTCATACGGCGGGTCGATAAG
GATTAAACCACGGCGGGAAACCGGCGGCAGTTTGGCCTTAAGCTGCTGGAAACCATCGGC
TTTTTCGACGCGCGCACGGCTGTCTTTCTGAAATTCAGAACGCAGCAACGGGTAATCGCT
CGGGTGCAGTTCGGTCAGTTGCAGGCTGTCTTGTTCGCGCAGTAGCTGGCGAGCAATCAA
TGGCGAACCGGGGTAGTAACGCAACTGACCGCTACGGTTGAAGTGTTTTACCACATTGAT
GTACGCCTCCAGTTCTGCGGGCAAATCGTCCTGCTGCCAGATACGGGCGATGCCTTCGAG
ATATTCGCCGGTACGCTCGGCATGTTCGCTGCCTAACTGATAACGCCCGGCCCCTGCGTG
GGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCAGGCTCTG
AACGGTATGTTTAAGGACGTCGGCGTGGTTGCCAGCGTGAAAGCTGTGGCGATAACTGAG
CAT
TTACTCCGGCACGATCCAGCTTACGGTGGCGTGCCCGGTGCCTGCCGGAACCAGTTTGCT
GTGCAGCCACGGCAGCACGTTATTCATCTGCTGTTCCAGTTTCCACGGCGGGTTAATCAC
AATCATGCCGGAAGCGGTCATGCCACGGCGATCGCTGTCTGGCAGTACCGCCAGTTCAAT
TTGCAGAATTTTGCGAATACCGGTCGCTTCCAGATCGTGGATCATGCGCTTAATTTGCTG
ACGCAGCACCACCGGATACCACAGTGCGTAAGTACCAGTGGCGAAACGTTTGTAACCTTC
TGCTATCCCGCTGACCACCGCCTGATAGTCGGTTTTCATTTCATACGGCGGGTCGATAAG
GATTAAACCACGGCGGGAAACCGGCGGCAGTTTGGCCTTAAGCTGCTGGAAACCATCGGC
TTTTTCGACGCGCGCACGGCTGTCTTTCTGAAATTCAGAACGCAGCAACGGGTAATCGCT
CGGGTGCAGTTCGGTCAGTTGCAGGCTGTCTTGTTCGCGCAGTAGCTGGCGAGCAATCAA
TGGCGAACCGGGGTAGTAACGCAACTGACCGCTACGGTTGAAGTGTTTTACCACATTGAT
GTACGCCTCCAGTTCTGCGGGCAAATCGTCCTGCTGCCAGATACGGGCGATGCCTTCGAG
ATATTCGCCGGTACGCTCGGCATGTTCGCTGCCTAACTGATAACGCCCGGCCCCTGCGTG
GGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCAGGCTCTG
AACGGTATGTTTAAGGACGTCGGCGTGGTTGCCAGCGTGAAAGCTGTGGCGATAACTGAG
CAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T228 | Caulobacter crescentus CB15 |
40.741 |
28.125 |
0.039 |