TAfinder detailed results

Overview

Job ID 9mizKMmBqU
Sequence name Escherichia coli strain DH5alpha chromosome, complete genome.
Predicted type III

Orphan Toxin (Protein)


Predicted family abiQ (T6365) Predicted domain -
Locus tag C1467_RS25455 Length 297 a.a.
Coordinates 2453894..2454787 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1467_RS12760 2450899..2452443 + 1545 WP_000702560.1 nitrate reductase subunit beta -
C1467_RS12765 2452443..2453138 + 696 WP_001166349.1 nitrate reductase molybdenum cofactor assembly chaperone -
C1467_RS12770 2453135..2453815 + 681 WP_000617116.1 respiratory nitrate reductase subunit gamma -
C1467_RS12775 2453894..2454787 + 894 WP_000804414.1 PhzF family isomerase Toxin
C1467_RS12780 2454883..2455728 - 846 WP_000187896.1 N-hydroxyarylamine O-acetyltransferase -
C1467_RS12785 2455901..2456470 + 570 WP_000085912.1 flavin reductase family protein -
C1467_RS12790 2456474..2456701 - 228 WP_001120141.1 tautomerase PptA -
C1467_RS12795 2456800..2457936 - 1137 Protein_2361 ISAs1 family transposase -
C1467_RS12800 2458303..2458422 + 120 Protein_2362 IS1 family transposase -
C1467_RS25455 2458444..2458839 - 396 WP_000759875.1 RHS element protein dsORF-e4 -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Toxin


No domain identified.



Sequences

Orphan Toxin        


Download         Length:         Molecular weight: 32252.67 Da        Isoelectric Point: 5.8361

>WP_000804414.1 Orphan_TA_54 Toxin
MKPQVYHVDAFTSQPFRGNSAGVVFPADNLSEAQMQLIARELGHSETAFLLHSDDSDVRI
RYFTPTVEVPICGHATVAAHYVRAKVLGLGNCTVWQTSLAGKHRVTIEKHNDDYRISLEQ
GTPGFEPPLEGETREAIINALHLTEDDILPGLPIQVATTGHSKVMIPLKPEVDIDALSPD
LAALSAISKQIGCNGFFPFQIRPGKNETDGRMFSPAIGIVEDPVTGNANGPMGAWLVHHN
VLPHDGNVLCVKGHQGRALGRDGMIEVTVTIRDNQPEKVTISGTAVILFHAEWAIEL*

Download         Length: 894 bp

>WP_000804414.1 Orphan_TA_54 Toxin
ATGAAACCGCAGGTTTACCACGTCGATGCTTTTACCTCTCAACCATTTCGCGGCAATTCT
GCCGGTGTTGTTTTCCCCGCCGATAATCTTAGCGAAGCGCAAATGCAGCTTATCGCCCGC
GAATTAGGTCATTCGGAAACTGCTTTTCTGCTGCACAGCGACGACAGCGATGTGCGCATC
CGCTACTTTACGCCAACAGTTGAAGTGCCGATTTGCGGTCACGCGACAGTAGCTGCGCAC
TATGTACGTGCGAAGGTGTTAGGTTTAGGAAATTGCACGGTCTGGCAAACATCGCTGGCA
GGAAAACATCGCGTGACTATCGAAAAGCACAACGATGATTATCGTATTTCGCTGGAACAA
GGTACGCCGGGCTTTGAACCGCCGCTGGAGGGTGAAACACGTGAGGCGATTATCAACGCG
CTTCATCTCACTGAGGACGATATTCTGCCAGGCTTGCCAATTCAGGTGGCAACAACAGGA
CACTCAAAAGTGATGATCCCGTTGAAACCAGAAGTGGATATCGACGCCCTTTCGCCTGAT
CTTGCTGCGCTGAGCGCTATCAGCAAACAGATTGGCTGCAATGGTTTCTTCCCGTTCCAG
ATCCGCCCAGGCAAAAACGAAACCGATGGTCGTATGTTCTCGCCTGCGATTGGTATTGTG
GAAGATCCGGTGACTGGCAATGCCAATGGCCCGATGGGTGCATGGTTGGTACATCACAAC
GTATTGCCCCACGATGGCAACGTGTTATGTGTTAAAGGCCATCAGGGGCGCGCATTGGGG
CGTGACGGCATGATTGAAGTGACGGTGACAATTCGTGATAACCAACCGGAAAAAGTCACC
ATTTCAGGCACAGCGGTGATTTTGTTTCATGCCGAATGGGCAATTGAACTCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T6365 Lactococcus lactis

30.508

32.24

0.06