TAfinder detailed results
Overview
| Job ID | 9mizKMmBqU | ||
| Sequence name | Escherichia coli strain DH5alpha chromosome, complete genome. | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | hicA (T3593) | Predicted domain | - |
| Locus tag | C1467_RS12260 | Length | 190 a.a. |
| Coordinates | 2336009..2336581 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1467_RS12225 | 2331251..2331685 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| C1467_RS12230 | 2331678..2334239 | + | 2562 | WP_000840335.1 | phage tail tape measure protein | - |
| C1467_RS12235 | 2334236..2334565 | + | 330 | WP_000847360.1 | phage tail protein | - |
| C1467_RS12240 | 2334565..2335263 | + | 699 | WP_001152622.1 | phage minor tail protein L | - |
| C1467_RS12245 | 2335269..2336012 | + | 744 | WP_001349921.1 | C40 family peptidase | - |
| C1467_RS12250 | 2336009..2336581 | + | 573 | WP_000847666.1 | tail assembly protein | Toxin |
| C1467_RS12255 | 2336642..2340055 | + | 3414 | WP_000033679.1 | host specificity protein J | - |
| C1467_RS12260 | 2340126..2340725 | + | 600 | WP_001233072.1 | Ail/Lom family outer membrane beta-barrel protein | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 19428.21 Da Isoelectric Point: 9.9872
>WP_000847666.1 Orphan_TA_51 Toxin
VKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDVSTSGLTAQLHETLPDGAVIHIVPR
VAGAKSGGVFQIVLGAAAIAGSFFTAGATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQ
MLAPKARTPRTQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEG
DGGQVVVIGR*
VKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDVSTSGLTAQLHETLPDGAVIHIVPR
VAGAKSGGVFQIVLGAAAIAGSFFTAGATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQ
MLAPKARTPRTQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEG
DGGQVVVIGR*
Download Length: 573 bp
>WP_000847666.1 Orphan_TA_51 Toxin
GTGAAAACGGGGGCTGAAGCCATCCGGGCACTGGCCACACAGCTCCCGGCGTTTCGTCAG
AAACTGAGCGACGGCTGGTATCAGGTACGGATTGCCGGGCGGGACGTCAGCACGTCCGGG
TTAACGGCGCAGTTACATGAGACTCTGCCTGATGGCGCTGTGATTCATATTGTTCCCAGA
GTCGCCGGGGCCAAGTCAGGTGGCGTATTCCAGATTGTCCTGGGGGCTGCCGCCATTGCC
GGATCATTCTTTACCGCCGGAGCCACCCTTGCAGCATGGGGGGCAGCCATTGGGGCCGGT
GGTATGACCGGCATCCTGTTTTCTCTCGGTGCCAGTATGGTGCTCGGTGGTGTGGCGCAG
ATGCTGGCACCGAAAGCCAGAACTCCCCGTACACAGACAACGGATAACGGTAAGCAGAAC
ACCTATTTCTCCTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCTGTTCTGTAC
GGGGAAATGCGCGTGGGGTCACGCGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGGG
GACGGTGGTCAGGTTGTGGTGATTGGTCGCTGA
GTGAAAACGGGGGCTGAAGCCATCCGGGCACTGGCCACACAGCTCCCGGCGTTTCGTCAG
AAACTGAGCGACGGCTGGTATCAGGTACGGATTGCCGGGCGGGACGTCAGCACGTCCGGG
TTAACGGCGCAGTTACATGAGACTCTGCCTGATGGCGCTGTGATTCATATTGTTCCCAGA
GTCGCCGGGGCCAAGTCAGGTGGCGTATTCCAGATTGTCCTGGGGGCTGCCGCCATTGCC
GGATCATTCTTTACCGCCGGAGCCACCCTTGCAGCATGGGGGGCAGCCATTGGGGCCGGT
GGTATGACCGGCATCCTGTTTTCTCTCGGTGCCAGTATGGTGCTCGGTGGTGTGGCGCAG
ATGCTGGCACCGAAAGCCAGAACTCCCCGTACACAGACAACGGATAACGGTAAGCAGAAC
ACCTATTTCTCCTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCTGTTCTGTAC
GGGGAAATGCGCGTGGGGTCACGCGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGGG
GACGGTGGTCAGGTTGTGGTGATTGGTCGCTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T3593 | Acinetobacter baumannii ATCC 17978 |
34.884 |
82.692 |
0.079 |