TAfinder detailed results

Overview

Job ID 9mizKMmBqU
Sequence name Escherichia coli strain DH5alpha chromosome, complete genome.
Predicted type II

Orphan Antitoxin (Protein)


Predicted family higA (AT6088) Predicted domain PRK10072 (HTH)
Locus tag C1467_RS00955 Length 96 a.a.
Coordinates 185206..185496 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1467_RS00920 180532..182601 + 2070 WP_001291771.1 glycine--tRNA ligase subunit beta -
C1467_RS00925 182902..184271 + 1368 WP_085947770.1 IS3-like element IS150 family transposase -
C1467_RS00930 184373..184522 + 150 Protein_171 type I toxin-antitoxin system toxin HokA -
C1467_RS00935 184713..184925 - 213 WP_000014594.1 RNA chaperone/antiterminator CspA -
C1467_RS00940 185206..185496 - 291 WP_000455798.1 HTH-type transcriptional regulator Antitoxin
C1467_RS00945 185930..186640 + 711 WP_000190517.1 DUF3053 domain-containing protein -
C1467_RS00950 186690..187664 - 975 WP_000805027.1 glyoxylate/hydroxypyruvate reductase GhrB -
C1467_RS00955 187768..188427 - 660 WP_000747625.1 OmpA family lipoprotein -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Antitoxin


No domain identified.



Sequences

Orphan Antitoxin        


Download         Length:         Molecular weight: 11032.87 Da        Isoelectric Point: 8.0395

>WP_000455798.1 Orphan_TA_4 Antitoxin
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV
AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME*

Download         Length: 291 bp

>WP_000455798.1 Orphan_TA_4 Antitoxin
CTATTCCATCAACTGCTTACTTAATGCCGGGTTGGCTTGAATCAAACGCATCAATTTTAG
TTCGGCACTTGAAGGCTTCACGCGTCTGGATTCCCATTCCTTTACCATGGCGACTGATAC
GCCCAAAACCCGGGCGAAATCATCGATTTTTAACCCTGTCCCTTTTCGTAACTGCTCAAT
TTCGGTACAGGACGTTGTTCTGTGCGTCAGGGTAATTTTCTGCGTTTCATCTTTAAAAAC
AATCTGTTCCAGGCTGCTCAACAGCTCATGCATTGGATCTTTATATTCCAT

Similar Proteins

Only experimentally validated proteins are listed.