TAfinder detailed results

Overview

Job ID 9mizKMmBqU
Sequence name Escherichia coli strain DH5alpha chromosome, complete genome.
Predicted type II

Orphan Antitoxin (Protein)


Predicted family hicB (AT10132) Predicted domain PF01402 (RHH)
Locus tag C1467_RS07715 Length 86 a.a.
Coordinates 1474276..1474536 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1467_RS07680 1469641..1470096 + 456 WP_000614044.1 DUF2824 family protein -
C1467_RS07685 1470099..1470791 + 693 WP_000964882.1 DNA transfer protein -
C1467_RS07690 1470801..1472189 + 1389 WP_000246948.1 phage DNA ejection protein -
C1467_RS07695 1472189..1474186 + 1998 WP_001029828.1 hypothetical protein -
C1467_RS07700 1474276..1474536 - 261 WP_000287053.1 Arc family DNA-binding protein Antitoxin
C1467_RS07705 1474658..1476856 + 2199 WP_001280400.1 phage head-binding domain-containing protein -
C1467_RS07710 1476889..1478016 - 1128 WP_000575660.1 acyltransferase -
C1467_RS07715 1478262..1479419 - 1158 WP_000958678.1 prophage integrase IntS -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Antitoxin


No domain identified.



Sequences

Orphan Antitoxin        


Download         Length:         Molecular weight: 9991.36 Da        Isoelectric Point: 7.3155

>WP_000287053.1 Orphan_TA_33 Antitoxin
MYSKYDEAQFHLRLPHELHAKIKQRAKMNNRSLNSEIIAAIEESLAKQSSASVYIDDAER
MAEQQSDMVKKIVFDTLKELYKKDSS*

Download         Length: 261 bp

>WP_000287053.1 Orphan_TA_33 Antitoxin
TTAGCTGCTGTCTTTTTTATATAGCTCTTTGAGCGTATCAAAGACAATTTTCTTAACCAT
ATCAGATTGTTGTTCTGCCATACGCTCTGCATCGTCAATGTAAACAGATGCAGAGCTTTG
TTTAGCCAATGATTCTTCAATCGCTGCAATTATCTCTGAGTTCAGCGACCTGTTATTCAT
CTTCGCACGCTGCTTAATTTTCGCGTGGAGTTCATGCGGAAGTCTCAAGTGAAACTGCGC
CTCGTCGTATTTGCTGTACAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
AT10132 Acetobacter pasteurianus strain Ab3

38.71

28.182

0.138
AT10150 Escherichia coli strain JIE143 transconjugant Tx143

27.907

37.391

0.138