TAfinder detailed results
Overview
| Job ID | 9mizKMmBqU | ||
| Sequence name | Escherichia coli strain DH5alpha chromosome, complete genome. | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | vapC (T76) | Predicted domain | PF00126 (HTH_1) |
| Locus tag | C1467_RS03400 | Length | 298 a.a. |
| Coordinates | 635624..636520 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1467_RS03330 | 631750..633081 | + | 1332 | WP_000401598.1 | amino acid permease | - |
| C1467_RS03335 | 633109..634419 | + | 1311 | WP_000460519.1 | cysteine desulfidase | - |
| C1467_RS03340 | 634631..634795 | - | 165 | WP_001295544.1 | protein YhaL | - |
| C1467_RS03345 | 634818..635519 | - | 702 | WP_000633577.1 | pirin family protein | - |
| C1467_RS03350 | 635624..636520 | + | 897 | WP_001041010.1 | DNA-binding transcriptional regulator YhaJ | Toxin |
| C1467_RS03360 | 636571..636927 | - | 357 | WP_001198780.1 | DUF805 domain-containing protein | - |
| C1467_RS03365 | 637169..637534 | - | 366 | WP_000384145.1 | DUF805 domain-containing protein | - |
| C1467_RS03370 | 637827..638813 | - | 987 | WP_000531193.1 | glutathionyl-hydroquinone reductase YqjG | - |
| C1467_RS03375 | 638883..639275 | - | 393 | WP_000732233.1 | DoxX family protein | - |
| C1467_RS03380 | 639461..639760 | - | 300 | WP_000096086.1 | YqjK-like family protein | - |
| C1467_RS03385 | 639750..640154 | - | 405 | WP_000785722.1 | phage holin family protein | - |
| C1467_RS03390 | 640157..640462 | - | 306 | WP_000031415.1 | YqjD family protein | - |
| C1467_RS03395 | 640500..640868 | - | 369 | WP_001297156.1 | DUF1090 family protein YqjC | - |
| C1467_RS03400 | 641015..641398 | - | 384 | WP_001166768.1 | EnvZ/OmpR regulon moderator MzrA | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 33229.38 Da Isoelectric Point: 6.3675
>WP_001041010.1 Orphan_TA_12 Toxin
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHR
TKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLA
AKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDH
PIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLG
VATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFSGK*
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHR
TKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLA
AKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDH
PIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLG
VATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFSGK*
Download Length: 897 bp
>WP_001041010.1 Orphan_TA_12 Toxin
ATGGCCAAAGAAAGGGCATTAACGCTGGAAGCACTACGGGTTATGGATGCGATCGATCGC
CGGGGCAGTTTTGCGGCGGCGGCGGATGAGCTGGGACGCGTGCCTTCCGCACTTAGCTAC
ACCATGCAAAAACTGGAAGAAGAGCTGGATGTGGTGCTGTTTGACCGCTCGGGCCATCGC
ACCAAATTCACCAATGTCGGGAGGATGTTGCTGGAGCGAGGGCGCGTTTTGCTGGAAGCC
GCAGATAAACTGACTACCGATGCGGAAGCCCTCGCGCGCGGTTGGGAAACGCATCTCACC
ATTGTGACCGAGGCGCTGGTACCGACACCTGCCTTTTTCCCGTTAATCGACAAACTGGCG
GCAAAAGCCAATACCCAACTGGCAATCATCACCGAAGTGCTGGCGGGGGCGTGGGAACGA
CTGGAGCAGGGGCGGGCGGATATCGTTATCGCGCCGGATATGCATTTTCGTTCCTCGTCG
GAGATCAACTCGCGCAAGCTCTATACCTTAATGAACGTCTACGTTGCCGCGCCTGATCAC
CCGATTCATCAGGAGCCGGAACCGTTATCTGAAGTGACGCGCGTGAAATATCGTGGAATT
GCGGTAGCGGATACCGCTCGTGAGCGCCCGGTGTTGACCGTACAGCTGCTGGACAAACAG
CCGCGCTTAACGGTGAGCACGATTGAAGATAAACGTCAGGCATTACTGGCGGGGCTTGGC
GTGGCGACGATGCCGTATCCGATGGTCGAAAAAGATATTGCGGAAGGGCGGTTGCGTGTC
GTCAGCCCGGAATCGACCAGCGAGATCGATATTATTATGGCCTGGCGTCGTGACAGTATG
GGGGAAGCGAAATCCTGGTGTCTGCGGGAAATTCCCAAACTTTTTAGCGGAAAATAA
ATGGCCAAAGAAAGGGCATTAACGCTGGAAGCACTACGGGTTATGGATGCGATCGATCGC
CGGGGCAGTTTTGCGGCGGCGGCGGATGAGCTGGGACGCGTGCCTTCCGCACTTAGCTAC
ACCATGCAAAAACTGGAAGAAGAGCTGGATGTGGTGCTGTTTGACCGCTCGGGCCATCGC
ACCAAATTCACCAATGTCGGGAGGATGTTGCTGGAGCGAGGGCGCGTTTTGCTGGAAGCC
GCAGATAAACTGACTACCGATGCGGAAGCCCTCGCGCGCGGTTGGGAAACGCATCTCACC
ATTGTGACCGAGGCGCTGGTACCGACACCTGCCTTTTTCCCGTTAATCGACAAACTGGCG
GCAAAAGCCAATACCCAACTGGCAATCATCACCGAAGTGCTGGCGGGGGCGTGGGAACGA
CTGGAGCAGGGGCGGGCGGATATCGTTATCGCGCCGGATATGCATTTTCGTTCCTCGTCG
GAGATCAACTCGCGCAAGCTCTATACCTTAATGAACGTCTACGTTGCCGCGCCTGATCAC
CCGATTCATCAGGAGCCGGAACCGTTATCTGAAGTGACGCGCGTGAAATATCGTGGAATT
GCGGTAGCGGATACCGCTCGTGAGCGCCCGGTGTTGACCGTACAGCTGCTGGACAAACAG
CCGCGCTTAACGGTGAGCACGATTGAAGATAAACGTCAGGCATTACTGGCGGGGCTTGGC
GTGGCGACGATGCCGTATCCGATGGTCGAAAAAGATATTGCGGAAGGGCGGTTGCGTGTC
GTCAGCCCGGAATCGACCAGCGAGATCGATATTATTATGGCCTGGCGTCGTGACAGTATG
GGGGAAGCGAAATCCTGGTGTCTGCGGGAAATTCCCAAACTTTTTAGCGGAAAATAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T76 | Mycobacterium tuberculosis H37Rv |
35.417 |
35.556 |
0.057 |