TAfinder detailed results

Overview

Job ID 9mizKMmBqU
Sequence name Escherichia coli strain DH5alpha chromosome, complete genome.
Predicted type II

Orphan Toxin (Protein)


Predicted family KacT (T10120) Predicted domain PRK10514
Locus tag C1467_RS23260 Length 147 a.a.
Coordinates 4499373..4499816 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1467_RS23245 4495083..4496387 - 1305 WP_000857856.1 isocitrate lyase -
C1467_RS23250 4496417..4498018 - 1602 WP_000138878.1 malate synthase A -
C1467_RS23255 4498287..4499216 - 930 WP_001122789.1 homoserine O-succinyltransferase -
C1467_RS23260 4499373..4499816 + 444 WP_000236960.1 acetyltransferase Toxin

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Toxin

PRK10514 (E-value: 1.4e-62, Score:207.9)

(2-144)

PRK10562 (E-value: 3.1e-19, Score:67.6)

(2-133)

PRK09831 (E-value: 3e-10, Score:38.4)

(4-136)

PTZ00330 (E-value: 1.7e-05, Score:22.8)

(84-139)

PF00583 (GNAT) (E-value: 1.2e-05, Score:22.8)

(70-155)

COG2153 (ElaA) (E-value: 0.00042, Score:18.2)

(82-139)

PF00583 (GNAT) (E-value: 0.00027, Score:17.1)

(810-870)

PRK07922 (E-value: 0.0027, Score:15.5)

(77-133)

PLN02706 (E-value: 0.0049, Score:14.6)

(89-142)

COG1246 (ArgA) (E-value: 0.017, Score:12)

(356-408)

PRK07757 (E-value: 0.046, Score:11.7)

(74-122)

PF08445 (FR47) (E-value: 0.031, Score:11.3)

(212-267)


Sequences

Orphan Toxin        


Download         Length:         Molecular weight: 16492.73 Da        Isoelectric Point: 4.4313

>WP_000236960.1 Orphan_TA_106 Toxin
MVISIRRSQHEEGEELVAIWCRSVDATHDFLSAEYRAELEELVRSFLPEAPLWVAVNERD
QPVGFMLLSGQHMDALFIDPDVRGCGVGRMLVEHALSMAPELTTNVNEQNEQAVGFYKKV
GFKVTGRSEVDDLGKPYPLLNLAYVGE*

Download         Length: 444 bp

>WP_000236960.1 Orphan_TA_106 Toxin
ATGGTTATTAGTATTCGCCGCTCACAGCATGAGGAAGGGGAGGAACTCGTTGCGATTTGG
TGTCGATCTGTCGATGCCACCCACGATTTTTTATCAGCAGAGTATCGGGCCGAGCTGGAA
GAGCTGGTTCGTTCCTTTCTGCCGGAAGCACCGTTGTGGGTCGCGGTTAATGAACGGGAT
CAGCCGGTTGGGTTTATGTTGTTAAGTGGGCAGCATATGGATGCGCTGTTTATCGATCCT
GATGTGCGCGGCTGCGGCGTGGGTCGGATGCTGGTGGAGCATGCGCTCTCGATGGCACCG
GAACTGACAACCAACGTTAATGAGCAAAATGAGCAGGCGGTTGGGTTCTATAAGAAGGTG
GGTTTTAAGGTTACGGGACGCTCTGAGGTGGACGATTTGGGGAAACCGTATCCGTTGCTG
AATCTGGCGTATGTGGGGGAATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T10120 Klebsiella pneumoniae subsp. pneumoniae HS11286

35.185

30.508

0.128
T200 Escherichia coli O157:H7 str. EDL933

35.185

30.857

0.128