TAfinder detailed results
Overview
| Job ID | 9mizKMmBqU | ||
| Sequence name | Escherichia coli strain DH5alpha chromosome, complete genome. | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | EcnA (AT10118) | Predicted domain | - |
| Locus tag | C1467_RS22520 | Length | 48 a.a. |
| Coordinates | 4342309..4342455 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1467_RS22465 | 4338492..4339226 | + | 735 | WP_000829498.1 | fumarate reductase iron-sulfur protein | - |
| C1467_RS22470 | 4339237..4339632 | + | 396 | WP_000208757.1 | fumarate reductase subunit FrdC | - |
| C1467_RS22475 | 4339643..4340002 | + | 360 | WP_001299198.1 | fumarate reductase subunit FrdD | - |
| C1467_RS22480 | 4340065..4341198 | + | 1134 | WP_001349957.1 | BlaEC family class C beta-lactamase | - |
| C1467_RS22485 | 4341287..4341820 | + | 534 | WP_001238378.1 | lipocalin Blc | - |
| C1467_RS22490 | 4341817..4342134 | - | 318 | WP_000118482.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| C1467_RS22495 | 4342309..4342455 | - | 147 | WP_000239596.1 | lipoprotein toxin entericidin B | Antitoxin |
| C1467_RS22500 | 4342566..4342691 | - | 126 | WP_000977757.1 | lipoprotein antitoxin entericidin A | - |
| C1467_RS22505 | 4342743..4343309 | - | 567 | WP_000257278.1 | elongation factor P | - |
| C1467_RS22510 | 4343351..4344379 | + | 1029 | WP_000940530.1 | EF-P beta-lysylation protein EpmB | - |
| C1467_RS22515 | 4344769..4345638 | + | 870 | WP_001008047.1 | YjeJ family protein | - |
| C1467_RS22520 | 4345688..4346041 | - | 354 | WP_000558209.1 | DUF4156 domain-containing protein | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 4809.53 Da Isoelectric Point: 7.9947
>WP_000239596.1 Orphan_TA_102 Antitoxin
MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAATKAQQ*
MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAATKAQQ*
Download Length: 147 bp
>WP_000239596.1 Orphan_TA_102 Antitoxin
TTATTGCTGCGCTTTCGTTGCTGCACCAGAAATCGCGTTACCGCCATCAGAAATGTCTTC
ACCAACGCCACGCGTGGTGTTGCAGGCAGTTAATACTGTTGAAAGCACCAGAACAGAAAA
GATCGCTGCAATTGTCTTCTTCACCAT
TTATTGCTGCGCTTTCGTTGCTGCACCAGAAATCGCGTTACCGCCATCAGAAATGTCTTC
ACCAACGCCACGCGTGGTGTTGCAGGCAGTTAATACTGTTGAAAGCACCAGAACAGAAAA
GATCGCTGCAATTGTCTTCTTCACCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10118 | Xanthomonas axonopodis pv. citri str. 306 |
31.818 |
88 |
0.286 |