TAfinder detailed results
Overview
| Job ID | 9mizKMmBqU | ||
| Sequence name | Escherichia coli strain DH5alpha chromosome, complete genome. | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | sam-T (T10178) | Predicted domain | - |
| Locus tag | C1467_RS19795 | Length | 192 a.a. |
| Coordinates | 3796497..3797075 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1467_RS19745 | 3792473..3792751 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| C1467_RS19750 | 3792744..3793100 | + | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| C1467_RS19755 | 3793157..3793930 | - | 774 | WP_000543895.1 | C40 family peptidase | - |
| C1467_RS19760 | 3794116..3794376 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| C1467_RS19765 | 3794379..3794657 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| C1467_RS19770 | 3794813..3795553 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| C1467_RS19775 | 3795524..3796291 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| C1467_RS19780 | 3796497..3797075 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | Toxin |
| C1467_RS19785 | 3797315..3799759 | + | 2445 | WP_000973081.1 | acyl-CoA dehydrogenase FadE | - |
| C1467_RS19790 | 3799802..3800248 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| C1467_RS19795 | 3800429..3801199 | + | 771 | WP_001118026.1 | 2-oxoglutaramate amidase | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 20814.75 Da Isoelectric Point: 6.3788
>WP_000284050.1 Orphan_TA_91 Toxin
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM
HFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGIST
SGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIH
ILIQLIEKEMVK*
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM
HFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGIST
SGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIH
ILIQLIEKEMVK*
Download Length: 579 bp
>WP_000284050.1 Orphan_TA_91 Toxin
TTACTTAACCATCTCTTTTTCAATTAACTGGATCAGGATATGGATCACTTTAATGTGAAT
CTCCTGAATGCGGTCGGCATAACCAAAGTGCGGAACGCGAATTTCGATATCCGCCGTGCC
AGCCATTTTACCGCCGTCTTTACCGGTCAGGGTGATCACTTTCATCCCCTTCTCACGCGC
CGCTGCGATCGCTTTGATCACGTTTGCAGAGTTACCGGAGGTGGAGATCCCCAGCAGTAC
ATCGCCTTCGCGACCTACCGCTTCAACGTAGCGGGAGAAAATATCATTGAAACCGAAATC
ATTACCGACGCAGGAAATATGACTAACGTCAGAAATAGCAATCGCCGGGTAGCCCGGACG
GTTTTCACGGTAGCGACCGGTCAACTCTTCGGCAAAGTGCATAGCGTCGCAATGGGAACC
GCCGTTGCCGCAGGAAAGCACTTTGCCACCGGCTTTAAAGCTGTCTGCTAACAGGACCGC
CGCGCGCTGAATGGCGTGAATATTGGCGTCATCTTTTAAAAAGTTAGCCAGCGTTTCCGC
CGCTTCGTTCAGTTCGTTACGAATAAGATCCTGGTACAT
TTACTTAACCATCTCTTTTTCAATTAACTGGATCAGGATATGGATCACTTTAATGTGAAT
CTCCTGAATGCGGTCGGCATAACCAAAGTGCGGAACGCGAATTTCGATATCCGCCGTGCC
AGCCATTTTACCGCCGTCTTTACCGGTCAGGGTGATCACTTTCATCCCCTTCTCACGCGC
CGCTGCGATCGCTTTGATCACGTTTGCAGAGTTACCGGAGGTGGAGATCCCCAGCAGTAC
ATCGCCTTCGCGACCTACCGCTTCAACGTAGCGGGAGAAAATATCATTGAAACCGAAATC
ATTACCGACGCAGGAAATATGACTAACGTCAGAAATAGCAATCGCCGGGTAGCCCGGACG
GTTTTCACGGTAGCGACCGGTCAACTCTTCGGCAAAGTGCATAGCGTCGCAATGGGAACC
GCCGTTGCCGCAGGAAAGCACTTTGCCACCGGCTTTAAAGCTGTCTGCTAACAGGACCGC
CGCGCGCTGAATGGCGTGAATATTGGCGTCATCTTTTAAAAAGTTAGCCAGCGTTTCCGC
CGCTTCGTTCAGTTCGTTACGAATAAGATCCTGGTACAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T10178 | Staphylococcus epidermidis isolate BPH0662 |
30.435 |
15.753 |
0.073 |