TAfinder detailed results

Overview

Job ID 9mizKMmBqU
Sequence name Escherichia coli strain DH5alpha chromosome, complete genome.
Predicted type I

Orphan Toxin (Protein)


Predicted family hokX (T10211) Predicted domain -
Locus tag C1467_RS17915 Length 50 a.a.
Coordinates 3422815..3422967 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1467_RS17865 3419155..3421395 + 2241 WP_001034879.1 siderophore enterobactin receptor FepA -
C1467_RS25590 3421435..3421533 + 99 Protein_3293 hypothetical protein -
C1467_RS17870 3421570..3422190 + 621 WP_001298903.1 enterobactin synthase subunit EntD -
C1467_RS17875 3422312..3422464 - 153 WP_000956465.1 type I toxin-antitoxin system toxin HokE -
C1467_RS17880 3422815..3422967 - 153 WP_000956456.1 type I toxin-antitoxin system toxin HokE Toxin
C1467_RS17895 3423409..3424527 + 1119 WP_001130619.1 YbdK family carboxylate-amine ligase -
C1467_RS17900 3424593..3424841 + 249 WP_000682518.1 DUF1158 domain-containing protein -
C1467_RS17905 3424906..3425274 + 369 WP_000360951.1 MmcQ/YjbR family DNA-binding protein -
C1467_RS17910 3425368..3426021 + 654 WP_000351464.1 oxygen-insensitive NAD(P)H nitroreductase -
C1467_RS17915 3426129..3427376 + 1248 WP_001153143.1 mechanosensitive ion channel YbdG -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Toxin


No domain identified.



Sequences

Orphan Toxin        


Download         Length:         Molecular weight: 5591.80 Da        Isoelectric Point: 7.7891

>WP_000956456.1 Orphan_TA_81 Toxin
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKVVLAYEPKK*

Download         Length: 153 bp

>WP_000956456.1 Orphan_TA_81 Toxin
CTACTTCTTCGGTTCGTAAGCGAGAACAACCTTAAACTCAATATTACGTTCCTTTACGGT
GAACTCACACAGCGAATCCCCGACCAGAAGCGTAAATCCCAGCACCGTTAAACACAGCAC
TATGACTGCCGCAAGGGCATATTTCGTCAGCAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T10211 E.coli NADPH-sulfite reductase flavoprotein component (cysJ) NADPH-sulfite reductase hemoprotein component (cysI) and 3'

54

100

0.529
T6369 Escherichia coli K-12

42.857

100

0.412
T10208 Escherichia coli C

44.444

90

0.392
T10210 Hafnia alvei

42

96.154

0.412
T6370 Escherichia coli

40.909

88

0.353
T6324 Escherichia coli

41.463

78.846

0.333
T6363 uncultured bacterium

41.463

78.846

0.333
T10039 Escherichia coli O157:H7 str. Sakai

38.298

92.157

0.353
T10209 Escherichia coli strain ECOR24

32.609

92

0.294
T10124 Erwinia amylovora ATCC 49946

41.935

96.875

0.255