TAfinder detailed results
Overview
| Job ID | 9mizKMmBqU | ||
| Sequence name | Escherichia coli strain DH5alpha chromosome, complete genome. | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | zeta (T10183) | Predicted domain | AAA_21 (AbiEii) |
| Locus tag | C1467_RS17840 | Length | 271 a.a. |
| Coordinates | 3411450..3412265 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1467_RS17815 | 3407139..3408095 | + | 957 | WP_001234314.1 | Fe2+-enterobactin ABC transporter substrate-binding protein | - |
| C1467_RS17820 | 3408099..3409349 | - | 1251 | WP_001041789.1 | enterobactin transporter EntS | - |
| C1467_RS17825 | 3409460..3410464 | + | 1005 | WP_001295314.1 | Fe(3+)-siderophore ABC transporter permease | - |
| C1467_RS17830 | 3410461..3411453 | + | 993 | WP_000640965.1 | iron-enterobactin ABC transporter permease | - |
| C1467_RS17835 | 3411450..3412265 | + | 816 | WP_000140647.1 | iron-enterobactin ABC transporter ATP-binding protein | Toxin |
| C1467_RS17840 | 3412262..3413395 | - | 1134 | WP_000096744.1 | LPS O-antigen length regulator Wzz(fepE) | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
AAA_21 (AbiEii) (E-value: 1.8e-06, Score:26)
AAA_21 (AbiEii) (E-value: 0.076, Score:10.8)
Sequences
Orphan Toxin
Download Length: Molecular weight: 29784.11 Da Isoelectric Point: 6.4974
>WP_000140647.1 Orphan_TA_79 Toxin
MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA
HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED
EEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQI
DLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTAELIERI
YGLRCMIIDDPVAGTPLVVPLGRTAPSTANS*
MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA
HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED
EEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQI
DLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTAELIERI
YGLRCMIIDDPVAGTPLVVPLGRTAPSTANS*
Download Length: 816 bp
>WP_000140647.1 Orphan_TA_79 Toxin
ATGACCGAATCAGTAGCCCGTTTGCGCGGCGAACAGTTAACCCTGGGATATGGCAAATAT
ACCGTTGCGGAAAATCTGACTGTAGAAATTCCTGATGGTCACTTCACGGCAATTATCGGA
CCAAATGGCTGTGGTAAATCCACGTTACTGCGTACCTTAAGCCGCCTGATGACGCCTGCT
CACGGGCATGTCTGGCTGGATGGCGAGCACATTCAACATTACGCCAGTAAAGAAGTTGCA
CGCCGGATTGGTCTGTTGGCGCAAAATGCTACCACGCCGGGCGATATCACCGTGCAGGAG
CTGGTGGCGCGTGGACGTTATCCGCATCAACCGCTGTTTACCCGCTGGCGCAAAGAGGAT
GAAGAAGCGGTAACGAAAGCGATGCAGGCCACGGGAATAACTCATCTGGCAGATCAAAGC
GTGGATACCCTTTCTGGCGGACAACGCCAGCGAGCGTGGATCGCGATGGTGCTGGCCCAG
GAAACGGCAATTATGCTGCTCGACGAACCCACGACCTGGCTGGATATCAGTCATCAGATT
GATCTACTGGAACTGTTAAGCGAACTGAACCGCGAGAAAGGCTATACCCTGGCGGCGGTG
CTGCACGATCTTAATCAGGCCTGTCGTTACGCCAGCCATTTGATTGCATTGCGGGAAGGG
AAAATTGTTGCTCAGGGAGCGCCGAAGGAGATTGTCACTGCTGAACTGATTGAGCGCATT
TATGGTCTGCGATGCATGATCATTGACGATCCGGTAGCCGGAACGCCGCTTGTGGTGCCG
CTCGGACGAACGGCACCTTCAACCGCAAATAGTTAA
ATGACCGAATCAGTAGCCCGTTTGCGCGGCGAACAGTTAACCCTGGGATATGGCAAATAT
ACCGTTGCGGAAAATCTGACTGTAGAAATTCCTGATGGTCACTTCACGGCAATTATCGGA
CCAAATGGCTGTGGTAAATCCACGTTACTGCGTACCTTAAGCCGCCTGATGACGCCTGCT
CACGGGCATGTCTGGCTGGATGGCGAGCACATTCAACATTACGCCAGTAAAGAAGTTGCA
CGCCGGATTGGTCTGTTGGCGCAAAATGCTACCACGCCGGGCGATATCACCGTGCAGGAG
CTGGTGGCGCGTGGACGTTATCCGCATCAACCGCTGTTTACCCGCTGGCGCAAAGAGGAT
GAAGAAGCGGTAACGAAAGCGATGCAGGCCACGGGAATAACTCATCTGGCAGATCAAAGC
GTGGATACCCTTTCTGGCGGACAACGCCAGCGAGCGTGGATCGCGATGGTGCTGGCCCAG
GAAACGGCAATTATGCTGCTCGACGAACCCACGACCTGGCTGGATATCAGTCATCAGATT
GATCTACTGGAACTGTTAAGCGAACTGAACCGCGAGAAAGGCTATACCCTGGCGGCGGTG
CTGCACGATCTTAATCAGGCCTGTCGTTACGCCAGCCATTTGATTGCATTGCGGGAAGGG
AAAATTGTTGCTCAGGGAGCGCCGAAGGAGATTGTCACTGCTGAACTGATTGAGCGCATT
TATGGTCTGCGATGCATGATCATTGACGATCCGGTAGCCGGAACGCCGCTTGTGGTGCCG
CTCGGACGAACGGCACCTTCAACCGCAAATAGTTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T10183 | Mycobacterium sp. MHSD3 |
30.556 |
36.923 |
0.081 |