TAfinder detailed results

Overview

Job ID 9mizKMmBqU
Sequence name Escherichia coli strain DH5alpha chromosome, complete genome.
Predicted type II

Orphan Antitoxin (Protein)


Predicted family vapB (AT6245) Predicted domain COG3311 (AlpA)
Locus tag C1467_RS13535 Length 84 a.a.
Coordinates 2590496..2590750 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1467_RS13465 2585921..2587048 - 1128 WP_000228824.1 DUF262 domain-containing protein -
C1467_RS13470 2587232..2587654 - 423 WP_001151237.1 DUF977 family protein -
C1467_RS13475 2587670..2588431 - 762 WP_000450660.1 DUF1627 domain-containing protein -
C1467_RS13480 2588454..2589200 - 747 WP_000788973.1 ATP-binding protein -
C1467_RS13485 2589207..2590064 - 858 WP_000899746.1 YdaU family protein -
C1467_RS13490 2590077..2590499 - 423 WP_000693802.1 toxin YdaT family protein -
C1467_RS13495 2590496..2590750 - 255 WP_001072342.1 hypothetical protein Antitoxin
C1467_RS13500 2590830..2591249 + 420 WP_000233319.1 helix-turn-helix domain-containing protein -
C1467_RS25565 2591535..2591669 + 135 WP_000233813.1 hypothetical protein -
C1467_RS13515 2591680..2591832 + 153 WP_001169153.1 DUF1391 family protein -
C1467_RS13520 2592253..2592474 + 222 WP_000560220.1 killing protein KilR -
C1467_RS13525 2592474..2592644 + 171 WP_001349883.1 YdaE family protein -
C1467_RS13530 2592719..2592994 + 276 WP_001349884.1 hypothetical protein -
C1467_RS13535 2593096..2595696 + 2601 WP_000105152.1 exodeoxyribonuclease VIII -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Antitoxin


No domain identified.



Sequences

Orphan Antitoxin        


Download         Length:         Molecular weight: 9250.59 Da        Isoelectric Point: 9.5506

>WP_001072342.1 Orphan_TA_61 Antitoxin
MNQKTLEDVIKTVRVSVVADVCGVSQRAIYKWMDNGKLPRTEYTGETNYAEKIAHASNGL
FSADAILTIGRNKTTTKKLMGVDS*

Download         Length: 255 bp

>WP_001072342.1 Orphan_TA_61 Antitoxin
TCATGAATCAACTCCCATCAGCTTTTTCGTAGTAGTTTTATTTCTGCCAATAGTTAAAAT
TGCATCGGCAGAAAATAATCCGTTTGATGCATGAGCGATTTTTTCAGCGTAATTTGTTTC
GCCGGTATATTCTGTGCGAGGCAATTTTCCGTTATCCATCCATTTGTAGATTGCTCTTTG
GCTGACACCACAAACGTCGGCCACAACAGAAACGCGAACAGTTTTGATTACATCTTCAAG
TGTTTTCTGGTTCAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
AT6245 Mycobacterium tuberculosis H37Rv

30.435

11.33

0.165