TAfinder detailed results

Overview

Job ID 9mizKMmBqU
Sequence name Escherichia coli strain DH5alpha chromosome, complete genome.
Predicted type II

Orphan Antitoxin (Protein)


Predicted family panA (AT10010) Predicted domain -
Locus tag C1467_RS11390 Length 62 a.a.
Coordinates 2186203..2186391 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1467_RS11360 2182640..2185696 + 3057 WP_000612993.1 FAD-binding and (Fe-S)-binding domain-containing protein -
C1467_RS11365 2185693..2186103 + 411 WP_000637982.1 1,4-dihydroxy-2-naphthoyl-CoA hydrolase -
C1467_RS11370 2186203..2186391 + 189 WP_001296104.1 YdiH family protein Antitoxin
C1467_RS11375 2186939..2187307 + 369 WP_000367160.1 Fe-S cluster assembly scaffold SufA -
C1467_RS11380 2187316..2188803 + 1488 WP_001297388.1 Fe-S cluster assembly protein SufB -
C1467_RS11385 2188813..2189559 + 747 WP_000948878.1 Fe-S cluster assembly ATPase SufC -
C1467_RS11390 2189534..2190805 + 1272 WP_000908012.1 Fe-S cluster assembly protein SufD -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Antitoxin


No domain identified.



Sequences

Orphan Antitoxin        


Download         Length:         Molecular weight: 7266.34 Da        Isoelectric Point: 4.9502

>WP_001296104.1 Orphan_TA_41 Antitoxin
MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLG
VH*

Download         Length: 189 bp

>WP_001296104.1 Orphan_TA_41 Antitoxin
ATGTCTACTCAACTTGATCCCACCCAGCTGGCCATTGAATTTTTACGCCGTGACCAGAGC
AATCTTTCACCTGCCCAATATCTCAAACGTCTGAAACAACTAGAACTTGAATTTGCTGAC
CTGCTTACTCTCTCTTCTGCTGAATTAAAAGAAGAAATCTACTTTGCCTGGCGTCTGGGC
GTGCATTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
AT10010 Burkholderia prophage phi52237

34.545

35.032

0.302