TAfinder detailed results
Overview
| Job ID | 9mizKMmBqU | ||
| Sequence name | Escherichia coli strain DH5alpha chromosome, complete genome. | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | higA (AT10133) | Predicted domain | - |
| Locus tag | C1467_RS07700 | Length | 151 a.a. |
| Coordinates | 1469641..1470096 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1467_RS07655 | 1465303..1466598 | + | 1296 | WP_001196941.1 | P22 phage major capsid protein family protein | - |
| C1467_RS07660 | 1466643..1466897 | + | 255 | WP_001349928.1 | hypothetical protein | - |
| C1467_RS07665 | 1466875..1467375 | + | 501 | WP_001054835.1 | packaged DNA stabilization gp4 family protein | - |
| C1467_RS07670 | 1467375..1468793 | + | 1419 | WP_001122413.1 | packaged DNA stabilization protein gp10 | - |
| C1467_RS07675 | 1468793..1469641 | + | 849 | WP_000785560.1 | tail needle knob protein | - |
| C1467_RS07680 | 1469641..1470096 | + | 456 | WP_000614044.1 | DUF2824 family protein | Antitoxin |
| C1467_RS07685 | 1470099..1470791 | + | 693 | WP_000964882.1 | DNA transfer protein | - |
| C1467_RS07690 | 1470801..1472189 | + | 1389 | WP_000246948.1 | phage DNA ejection protein | - |
| C1467_RS07695 | 1472189..1474186 | + | 1998 | WP_001029828.1 | hypothetical protein | - |
| C1467_RS07700 | 1474276..1474536 | - | 261 | WP_000287053.1 | Arc family DNA-binding protein | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 17413.93 Da Isoelectric Point: 7.7389
>WP_000614044.1 Orphan_TA_32 Antitoxin
MIQFKPTRNIDLIEAVGNHPDIIAGSNNGDGYDYKPECRYFEVNVHGQFGGIVYYQEIQP
LTFDCHAMYLPEVRGFSKEIGMAFWRYILTNTTVQCVTSFAARKFRHGQMYCAMIGLKRV
GTIKKYFKGVDDVTFYSATREELIDFLNHGR*
MIQFKPTRNIDLIEAVGNHPDIIAGSNNGDGYDYKPECRYFEVNVHGQFGGIVYYQEIQP
LTFDCHAMYLPEVRGFSKEIGMAFWRYILTNTTVQCVTSFAARKFRHGQMYCAMIGLKRV
GTIKKYFKGVDDVTFYSATREELIDFLNHGR*
Download Length: 456 bp
>WP_000614044.1 Orphan_TA_32 Antitoxin
ATGATTCAGTTCAAACCAACGCGAAACATCGACCTGATAGAAGCAGTCGGAAATCACCCT
GACATTATTGCCGGAAGCAACAACGGTGATGGATACGACTACAAGCCTGAATGCCGTTAC
TTTGAGGTGAACGTGCACGGTCAGTTTGGCGGCATTGTTTACTATCAGGAGATTCAGCCG
CTGACATTCGATTGCCACGCCATGTACCTGCCAGAGGTTCGTGGATTCAGCAAGGAAATC
GGGATGGCGTTCTGGCGATACATTCTGACTAACACCACCGTTCAGTGCGTCACATCGTTC
GCTGCGCGCAAATTCCGCCACGGTCAGATGTACTGCGCAATGATTGGCCTTAAGCGAGTA
GGAACCATCAAGAAATACTTCAAAGGCGTGGATGACGTGACGTTTTACAGCGCCACACGC
GAAGAACTAATCGACTTCCTGAATCACGGGAGATAG
ATGATTCAGTTCAAACCAACGCGAAACATCGACCTGATAGAAGCAGTCGGAAATCACCCT
GACATTATTGCCGGAAGCAACAACGGTGATGGATACGACTACAAGCCTGAATGCCGTTAC
TTTGAGGTGAACGTGCACGGTCAGTTTGGCGGCATTGTTTACTATCAGGAGATTCAGCCG
CTGACATTCGATTGCCACGCCATGTACCTGCCAGAGGTTCGTGGATTCAGCAAGGAAATC
GGGATGGCGTTCTGGCGATACATTCTGACTAACACCACCGTTCAGTGCGTCACATCGTTC
GCTGCGCGCAAATTCCGCCACGGTCAGATGTACTGCGCAATGATTGGCCTTAAGCGAGTA
GGAACCATCAAGAAATACTTCAAAGGCGTGGATGACGTGACGTTTTACAGCGCCACACGC
GAAGAACTAATCGACTTCCTGAATCACGGGAGATAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10133 | Acetobacter pasteurianus strain Ab3 |
41.379 |
8.011 |
0.079 |