TAfinder detailed results
Overview
| Job ID | 9mizKMmBqU | ||
| Sequence name | Escherichia coli strain DH5alpha chromosome, complete genome. | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | mazE (AT10073) | Predicted domain | - |
| Locus tag | C1467_RS06810 | Length | 251 a.a. |
| Coordinates | 1314404..1315161 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1467_RS06765 | 1309987..1311048 | + | 1062 | WP_000892044.1 | AI-2E family transporter | - |
| C1467_RS06775 | 1311086..1311934 | - | 849 | WP_001244723.1 | formate transporter FocB | - |
| C1467_RS06780 | 1311956..1313968 | - | 2013 | WP_001251580.1 | DNA-binding transcriptional regulator HyfR | - |
| C1467_RS06785 | 1313998..1314411 | - | 414 | WP_000133936.1 | hydrogenase 4 assembly chaperone HyfJ | - |
| C1467_RS06790 | 1314404..1315161 | - | 756 | Protein_1240 | hydrogenase 4 catalytic subunit HyfI | Antitoxin |
| C1467_RS06795 | 1315158..1315697 | - | 540 | WP_000916082.1 | hydrogenase 4 subunit H | - |
| C1467_RS06800 | 1315707..1317422 | - | 1716 | WP_001102298.1 | hydrogenase 4 catalytic subunit HyfG | - |
| C1467_RS06805 | 1317412..1318992 | - | 1581 | WP_000122538.1 | hydrogenase 4 subunit F | - |
| C1467_RS06810 | 1318997..1319647 | - | 651 | WP_000147987.1 | hydrogenase 4 membrane subunit | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 27434.28 Da Isoelectric Point: 9.7335
>Protein_1240 Orphan_TA_26 Antitoxin
MSPVLTQYVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD
AERFGIKVISSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGAGGGFSTI
STASGAAATPLSPLMFGSPAARQHRPPPFTVSPWRSVCCNRRFTRWIIAIPPG*LCNRCG
RRSRHHRVSPLSEKRGGWRAIVRGEKFAIGSCAI*ATILQEIGLTPGCAMPTIHVSIVSF
SNSFAYSGGYMT
MSPVLTQYVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD
AERFGIKVISSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGAGGGFSTI
STASGAAATPLSPLMFGSPAARQHRPPPFTVSPWRSVCCNRRFTRWIIAIPPG*LCNRCG
RRSRHHRVSPLSEKRGGWRAIVRGEKFAIGSCAI*ATILQEIGLTPGCAMPTIHVSIVSF
SNSFAYSGGYMT
Download Length: 758 bp
>Protein_1240 Orphan_TA_26 Antitoxin
TCAGTCATGTAACCCCCGGAGTACGCGAAAGAGTTGCTGAACGATACTATTGAGACGTGG
ATCGTCGGCATCGCGCAACCAGGTGTTAACCCGATTTCCTGTAGGATCGTCGCTTAAATG
GCGCAGGAGCCGATCGCAAATTTCTCGCCCCTGACGATAGCCCGCCAGCCGCCGCGCTTC
TCGCTCAATGGCGATACGCGGTGATGGCGGGATCTGCGGCCACAACGGTTGCATAGTCAC
CCCGGTGGGATCGCGATAATCCACCGCGTGAATCTTCTGTTGCAGCAAACCGAGCGCCAC
GGCGAAACCGTGAATGGTGGCGGCCGGTGTTGGCGGGCAGCCGGGGATCCAAACATCAAT
GGGGACAATGGTGTCGCTGCCGCCCCAGACGCTGTAGAGATCGTGGAAAATCCGCCGCCG
GCACCGCACGCGCCGTAGGAAACACAGATTTTATGATCGGGGGCAGACTCATACGCCCGA
AGTGCAGGCATACGCATCGCCCGGGTGACTGCGCCTGTAAATAACAAAATATCGGCGTGA
CGCGGTGATGAAATAACCTTAATGCCAAAACGTTCTGCGTCGAATACTGGTGTGATGGCG
GCAAAAATTTCGATTTCACAGGCGTTGCAGCCGCCGCAATCGACGCGATAAACGTAAGCC
GAGCGACGGATATCCTGTAGCAAATGCTGCTTCATCTTTTGCGTTTGCTCGTCCAGCGTG
ATGGGCTGGCTGACATATTGCGTAAGCACTGGACTCAT
TCAGTCATGTAACCCCCGGAGTACGCGAAAGAGTTGCTGAACGATACTATTGAGACGTGG
ATCGTCGGCATCGCGCAACCAGGTGTTAACCCGATTTCCTGTAGGATCGTCGCTTAAATG
GCGCAGGAGCCGATCGCAAATTTCTCGCCCCTGACGATAGCCCGCCAGCCGCCGCGCTTC
TCGCTCAATGGCGATACGCGGTGATGGCGGGATCTGCGGCCACAACGGTTGCATAGTCAC
CCCGGTGGGATCGCGATAATCCACCGCGTGAATCTTCTGTTGCAGCAAACCGAGCGCCAC
GGCGAAACCGTGAATGGTGGCGGCCGGTGTTGGCGGGCAGCCGGGGATCCAAACATCAAT
GGGGACAATGGTGTCGCTGCCGCCCCAGACGCTGTAGAGATCGTGGAAAATCCGCCGCCG
GCACCGCACGCGCCGTAGGAAACACAGATTTTATGATCGGGGGCAGACTCATACGCCCGA
AGTGCAGGCATACGCATCGCCCGGGTGACTGCGCCTGTAAATAACAAAATATCGGCGTGA
CGCGGTGATGAAATAACCTTAATGCCAAAACGTTCTGCGTCGAATACTGGTGTGATGGCG
GCAAAAATTTCGATTTCACAGGCGTTGCAGCCGCCGCAATCGACGCGATAAACGTAAGCC
GAGCGACGGATATCCTGTAGCAAATGCTGCTTCATCTTTTGCGTTTGCTCGTCCAGCGTG
ATGGGCTGGCTGACATATTGCGTAAGCACTGGACTCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10073 | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 strain R1 |
30.952 |
56.757 |
0.052 |