TAfinder detailed results

Overview

Job ID 9mizKMmBqU
Sequence name Escherichia coli strain DH5alpha chromosome, complete genome.
Predicted type I

Orphan Toxin (Protein)


Predicted family timP (T10087) Predicted domain -
Locus tag C1467_RS06605 Length 41 a.a.
Coordinates 1272068..1272193 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1467_RS06580 1267258..1269108 + 1851 WP_001196613.1 Fe-S protein assembly chaperone HscA -
C1467_RS06585 1269110..1269445 + 336 WP_001124469.1 ISC system 2Fe-2S type ferredoxin -
C1467_RS06590 1269457..1269657 + 201 WP_000523618.1 Fe-S cluster assembly protein IscX -
C1467_RS06595 1269835..1271118 + 1284 WP_000133591.1 aminopeptidase PepB -
C1467_RS06600 1271260..1272036 + 777 WP_001298978.1 enhanced serine sensitivity protein SseB -
C1467_RS25410 1272068..1272193 - 126 WP_001385884.1 small toxic inner membrane protein TimP Toxin
C1467_RS06605 1272529..1273374 - 846 WP_000108626.1 3-mercaptopyruvate sulfurtransferase -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Toxin


No domain identified.



Sequences

Orphan Toxin        


Download         Length:         Molecular weight: 4496.28 Da        Isoelectric Point: 9.6571

>WP_001385884.1 Orphan_TA_25 Toxin
MKIRCFCIVLIVSGALFSQVNNNRSLSGDNLLVVNNLQSSK*

Download         Length: 126 bp

>WP_001385884.1 Orphan_TA_25 Toxin
TTACTTGCTGCTCTGAAGGTTGTTAACCACCAGTAAATTGTCGCCGGAGAGACTCCGGTT
ATTATTTACTTGGGAAAACAGCGCACCAGAAACAATAAGTACGATACAGAAGCACCGTAT
CTTCAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T10087 Escherichia coli str. K-12 substr. MG1655

92.683

100

0.905
T10086 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

48.718

100

0.452