TAfinder detailed results

Overview

Job ID 9mizKMmBqU
Sequence name Escherichia coli strain DH5alpha chromosome, complete genome.
Predicted type II

Orphan Antitoxin (Protein)


Predicted family yjhQ (AT6279) Predicted domain PF13527 (Acetyltransf_9)
Locus tag C1467_RS03125 Length 167 a.a.
Coordinates 586699..587202 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1467_RS03065 582877..583884 - 1008 WP_000130392.1 LLM class flavin-dependent oxidoreductase -
C1467_RS03070 584090..584968 - 879 WP_001297426.1 U32 family peptidase -
C1467_RS03075 584977..585972 - 996 WP_001298771.1 peptidase U32 family protein -
C1467_RS03080 586181..586705 + 525 WP_001295552.1 SCP2 domain-containing protein -
C1467_RS03085 586699..587202 + 504 WP_000908554.1 N-acetyltransferase Antitoxin
C1467_RS03090 587189..587491 - 303 WP_001345969.1 DNA damage response exodeoxyribonuclease YhbQ -
C1467_RS03095 587542..587985 + 444 WP_000449451.1 YhbP family protein -
C1467_RS03100 587965..588483 - 519 WP_000037608.1 protein/nucleic acid deglycase -
C1467_RS03105 588611..589246 + 636 WP_001315854.1 NAD(P)H-binding protein -
C1467_RS03110 589319..590359 + 1041 WP_000147619.1 permease -
C1467_RS03115 590473..591048 - 576 WP_000646033.1 division/outer membrane stress-associated lipid-binding lipoprotein -
C1467_RS03120 591058..591648 - 591 WP_001158035.1 DnaA initiator-associating protein DiaA -
C1467_RS03125 591668..592063 - 396 WP_000246865.1 YraN family protein -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Antitoxin

PF13527 (Acetyltransf_9) (E-value: 9.4e-06, Score:22.9)

(48-132)

COG1246 (ArgA) (E-value: 2.1e-05, Score:21.6)

(333-415)

COG2153 (ElaA) (E-value: 0.00026, Score:18.9)

(52-133)

PF00583 (GNAT) (E-value: 0.00035, Score:18)

(72-165)

PF13508 (Acetyltransf_7) (E-value: 0.00047, Score:17.1)

(42-117)

COG2388 (YidJ) (E-value: 0.0012, Score:17)

(64-91)

PRK07922 (E-value: 0.0014, Score:16.4)

(50-126)

PRK07757 (E-value: 0.0024, Score:15.8)

(51-122)

TIGR02406 (ectoine_EctA) (E-value: 0.0084, Score:13.8)

(25-107)

PF08445 (FR47) (E-value: 0.0064, Score:13.6)

(212-282)

PRK10975 (E-value: 0.072, Score:10.8)

(136-182)


Sequences

Orphan Antitoxin        


Download         Length:         Molecular weight: 18533.79 Da        Isoelectric Point: 4.3297

>WP_000908554.1 Orphan_TA_10 Antitoxin
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVIGYVAFS
PVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRF
GFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEYHEHFNRF*

Download         Length: 504 bp

>WP_000908554.1 Orphan_TA_10 Antitoxin
ATGCTAATTCGAGTAGAAATTCCCATTGATGCGCCGGGTATTGATGCCCTGCTGCGTCGC
TCATTCGAAAGTGATGCGGAAGCGAAGCTGGTTCACGATCTGCGTGAAGATGGCTTTCTG
ACGCTGGGGCTGGTGGCGACAGATGACGAAGGTCAGGTCATTGGCTATGTGGCATTTAGT
CCGGTTGATGTGCAGGGCGAAGACCTGCAATGGGTCGGCATGGCACCGTTGGCGGTTGAT
GAAAAATACCGTGGACAGGGGCTGGCACGCCAACTGGTCTATGAAGGACTCGATTCGCTT
AATGAGTTCGGCTATGCCGCAGTGGTGACGCTGGGCGATCCGGCGCTGTACAGTCGTTTC
GGCTTTGAACTGGCGGCGCATCACGATCTGCGTTGCCGCTGGCCGGGCACTGAAAGCGCC
TTCCAGGTACATCGTTTAGCGGATGACGCGCTGAATGGCGTTACCGGCCTGGTTGAGTAT
CACGAGCATTTCAATCGCTTTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
AT6279 Escherichia coli str. K-12 substr. MG1655

35.246

67.403

0.256