MGE detailed information
MGE type: Integron MGE length: 64570 bp
Accession: NZ_OW443151 Location: 308793..373362 Organism: Vibrio cholerae strain CNRVC190247 isolate YE-NCPHL-18035-PI Replicon: chromosome
Accession: NZ_OW443151 Location: 308793..373362 Organism: Vibrio cholerae strain CNRVC190247 isolate YE-NCPHL-18035-PI Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OC536_RS15415 (CNRVC190247_03099) | 304112..305242 | + | 1131 | WP_000139219.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| OC536_RS15420 (CNRVC190247_03100) | 305535..307463 | + | 1929 | WP_001121787.1 | threonine--tRNA ligase | - |
| OC536_RS15425 (CNRVC190247_03101) | 307467..308018 | + | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| OC536_RS15430 (CNRVC190247_03102) | 308122..308316 | + | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| OC536_RS15435 (CNRVC190247_03103) | 308358..308711 | + | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| OC536_RS15440 (CNRVC190247_03104) | 308793..309755 | - | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| OC536_RS15445 (CNRVC190247_03105) | 310004..310435 | + | 432 | WP_000795498.1 | hypothetical protein | - |
| OC536_RS15450 | 310739..310902 | + | 164 | Protein_254 | DUF645 family protein | - |
| OC536_RS15455 | 311032..311208 | + | 177 | WP_262102101.1 | acetyltransferase | - |
| OC536_RS15460 | 311269..311406 | + | 138 | WP_002022145.1 | DUF645 family protein | - |
| OC536_RS15465 (CNRVC190247_03106) | 311630..311935 | + | 306 | WP_000064427.1 | hypothetical protein | - |
| OC536_RS15470 (CNRVC190247_03107) | 312105..312467 | + | 363 | WP_000391481.1 | DUF6232 family protein | - |
| OC536_RS15475 (CNRVC190247_03109) | 312623..313201 | + | 579 | WP_000461673.1 | DUF2726 domain-containing protein | - |
| OC536_RS15480 (CNRVC190247_03110) | 313853..314335 | + | 483 | WP_000422945.1 | GNAT family protein | - |
| OC536_RS15485 (CNRVC190247_03111) | 314473..315399 | + | 927 | WP_172779530.1 | PD-(D/E)XK nuclease superfamily protein | - |
| OC536_RS15490 | 315456..315527 | + | 72 | Protein_262 | acetyltransferase | - |
| OC536_RS15495 (CNRVC190247_03112) | 315544..316233 | + | 690 | WP_210942339.1 | hypothetical protein | - |
| OC536_RS15500 | 316258..316350 | + | 93 | WP_081641279.1 | DUF3265 domain-containing protein | - |
| OC536_RS15505 (CNRVC190247_03113) | 316400..317200 | + | 801 | WP_113601608.1 | PhzF family phenazine biosynthesis protein | - |
| OC536_RS15510 (CNRVC190247_03114) | 317366..318106 | + | 741 | WP_172779533.1 | PhzF family phenazine biosynthesis protein | - |
| OC536_RS15515 (CNRVC190247_03115) | 318438..319094 | + | 657 | WP_000361703.1 | Pentapeptide repeat protein | ARG |
| OC536_RS15520 (CNRVC190247_03116) | 319326..319577 | + | 252 | WP_001250177.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OC536_RS15525 (CNRVC190247_03117) | 319567..319854 | + | 288 | WP_172779531.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OC536_RS15530 (CNRVC190247_03118) | 320001..320288 | + | 288 | WP_032477325.1 | hypothetical protein | - |
| OC536_RS15535 (CNRVC190247_03119) | 320515..320802 | + | 288 | WP_032477340.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OC536_RS15540 (CNRVC190247_03120) | 320813..321130 | + | 318 | WP_032477342.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| OC536_RS15545 (CNRVC190247_03121) | 321331..321612 | + | 282 | WP_000086649.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OC536_RS15550 (CNRVC190247_03122) | 321609..321896 | + | 288 | WP_000869999.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OC536_RS15555 (CNRVC190247_03123) | 322051..322548 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| OC536_RS15560 (CNRVC190247_03124) | 322545..322817 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| OC536_RS15565 | 323172..323354 | + | 183 | WP_032477360.1 | DUF645 family protein | - |
| OC536_RS15570 (CNRVC190247_03125) | 324009..324395 | + | 387 | WP_029628680.1 | MmcQ/YjbR family DNA-binding protein | - |
| OC536_RS15575 (CNRVC190247_03126) | 324537..324896 | + | 360 | WP_001900224.1 | hypothetical protein | - |
| OC536_RS15580 (CNRVC190247_03127) | 325046..325342 | + | 297 | WP_001069046.1 | hypothetical protein | - |
| OC536_RS15585 (CNRVC190247_03128) | 325948..326244 | + | 297 | WP_000617998.1 | Dabb family protein | - |
| OC536_RS15590 | 326557..326679 | + | 123 | WP_080284773.1 | DUF645 family protein | - |
| OC536_RS15595 | 326857..327015 | + | 159 | Protein_283 | acetyltransferase | - |
| OC536_RS15600 | 327119..327272 | + | 154 | Protein_284 | DUF645 family protein | - |
| OC536_RS15605 | 327389..327451 | + | 63 | Protein_285 | acetyltransferase | - |
| OC536_RS15610 (CNRVC190247_03129) | 327509..327796 | + | 288 | WP_032477326.1 | toxin HigB-2 | Toxin Detail |
| OC536_RS15615 (CNRVC190247_03130) | 327783..328097 | + | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| OC536_RS15620 (CNRVC190247_03131) | 328266..328769 | + | 504 | WP_032477327.1 | DinB family protein | - |
| OC536_RS15625 (CNRVC190247_03132) | 328953..329183 | - | 231 | WP_000838533.1 | PAS factor family protein | - |
| OC536_RS15630 (CNRVC190247_03133) | 329411..329950 | + | 540 | WP_000884557.1 | hydrolase | - |
| OC536_RS15635 | 330260..330442 | + | 183 | WP_000923320.1 | DUF645 family protein | - |
| OC536_RS15640 (CNRVC190247_03134) | 330641..330955 | + | 315 | WP_000248689.1 | DUF4144 domain-containing protein | - |
| OC536_RS15645 | 331300..331446 | + | 147 | WP_228006404.1 | DUF645 family protein | - |
| OC536_RS15650 (CNRVC190247_03135) | 331664..332020 | + | 357 | WP_001094969.1 | DUF6404 family protein | - |
| OC536_RS15655 (CNRVC190247_03136) | 332164..332481 | - | 318 | WP_001180238.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OC536_RS15660 (CNRVC190247_03137) | 332500..332742 | - | 243 | WP_000557291.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OC536_RS15665 (CNRVC190247_03138) | 332987..333241 | + | 255 | WP_001223794.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| OC536_RS15670 (CNRVC190247_03139) | 333234..333497 | + | 264 | WP_000098715.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| OC536_RS15675 (CNRVC190247_03140) | 333654..334136 | + | 483 | WP_000422945.1 | GNAT family protein | - |
| OC536_RS15680 (CNRVC190247_03141) | 334264..334554 | - | 291 | WP_032477347.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OC536_RS15685 (CNRVC190247_03142) | 334544..334792 | - | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OC536_RS15690 (CNRVC190247_03143) | 334991..335305 | + | 315 | WP_000248689.1 | DUF4144 domain-containing protein | - |
| OC536_RS15695 | 335620..335742 | + | 123 | Protein_303 | DUF645 family protein | - |
| OC536_RS15700 | 335723..335824 | + | 102 | WP_080284778.1 | Tfp pilus assembly protein | - |
| OC536_RS15705 | 335977..336150 | + | 174 | WP_172779494.1 | hypothetical protein | - |
| OC536_RS15710 (CNRVC190247_03144) | 336489..337079 | + | 591 | WP_000589659.1 | DUF1294 domain-containing protein | - |
| OC536_RS15715 (CNRVC190247_03145) | 337243..337839 | + | 597 | WP_050503364.1 | hypothetical protein | - |
| OC536_RS15720 (CNRVC190247_03146) | 337862..338743 | - | 882 | Protein_308 | IS30 family transposase ISVvu6 | Transposase |
| OC536_RS15730 (CNRVC190247_03149) | 340313..341050 | + | 738 | WP_032477355.1 | Levodione reductase | VF |
| OC536_RS15735 | 341028..341165 | + | 138 | WP_113707170.1 | DUF3265 domain-containing protein | - |
| OC536_RS15740 | 341377..341530 | + | 154 | Protein_312 | DUF645 family protein | - |
| OC536_RS15745 (CNRVC190247_03150) | 341728..342048 | + | 321 | WP_000248687.1 | DUF4144 domain-containing protein | - |
| OC536_RS15750 (CNRVC190247_03151) | 342275..342469 | + | 195 | WP_000526238.1 | hypothetical protein | - |
| OC536_RS15755 | 342502..342597 | + | 96 | WP_075042587.1 | DUF3265 domain-containing protein | - |
| OC536_RS15760 (CNRVC190247_03152) | 342605..342922 | - | 318 | WP_000077449.1 | CcdB family protein | - |
| OC536_RS15765 (CNRVC190247_03153) | 342922..343167 | - | 246 | WP_001260801.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| OC536_RS15770 (CNRVC190247_03154) | 343347..343802 | + | 456 | Protein_318 | GNAT family N-acetyltransferase | - |
| OC536_RS15775 (CNRVC190247_03155) | 343949..344308 | + | 360 | WP_000609948.1 | HNH endonuclease signature motif containing protein | - |
| OC536_RS15780 (CNRVC190247_03156) | 344476..344754 | - | 279 | WP_000578473.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| OC536_RS15785 (CNRVC190247_03157) | 344751..345035 | - | 285 | WP_000381186.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| OC536_RS15790 | 345647..345853 | + | 207 | WP_080284769.1 | DUF3709 domain-containing protein | - |
| OC536_RS15795 (CNRVC190247_03158) | 346170..346562 | + | 393 | WP_001085003.1 | nuclear transport factor 2 family protein | - |
| OC536_RS15800 (CNRVC190247_03159) | 346702..346989 | + | 288 | WP_032477325.1 | hypothetical protein | - |
| OC536_RS15805 | 347492..347560 | + | 69 | Protein_325 | acetyltransferase | - |
| OC536_RS15810 | 347739..347909 | + | 171 | WP_080284771.1 | DUF645 family protein | - |
| OC536_RS15815 (CNRVC190247_03161) | 348108..348386 | - | 279 | WP_000578475.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| OC536_RS15820 (CNRVC190247_03162) | 348383..348667 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| OC536_RS15825 | 348783..348926 | + | 144 | WP_080284772.1 | acetyltransferase | - |
| OC536_RS15830 | 349026..349202 | + | 177 | WP_001891218.1 | DUF645 family protein | - |
| OC536_RS15835 | 349583..349736 | + | 154 | Protein_331 | DUF645 family protein | - |
| OC536_RS15840 | 350248..350374 | + | 127 | Protein_332 | DUF3265 domain-containing protein | - |
| OC536_RS15845 | 350480..350539 | + | 60 | WP_229022487.1 | hypothetical protein | - |
| OC536_RS15850 | 350527..350769 | + | 243 | WP_232060211.1 | DUF3709 domain-containing protein | - |
| OC536_RS15855 | 350961..351152 | + | 192 | WP_113707167.1 | disulfide bond formation protein DsbD | - |
| OC536_RS15860 | 351170..351406 | + | 237 | WP_032477346.1 | DUF3709 domain-containing protein | - |
| OC536_RS15865 | 351797..351979 | + | 183 | WP_032477360.1 | DUF645 family protein | - |
| OC536_RS15870 (CNRVC190247_03163) | 352631..352951 | + | 321 | WP_000248687.1 | DUF4144 domain-containing protein | - |
| OC536_RS15875 (CNRVC190247_03164) | 353107..353493 | + | 387 | WP_029628680.1 | MmcQ/YjbR family DNA-binding protein | - |
| OC536_RS15880 (CNRVC190247_03165) | 353635..353994 | + | 360 | WP_001900224.1 | hypothetical protein | - |
| OC536_RS15885 (CNRVC190247_03166) | 354144..354440 | + | 297 | WP_001069046.1 | hypothetical protein | - |
| OC536_RS15890 (CNRVC190247_03167) | 355126..355413 | + | 288 | WP_032477340.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OC536_RS15895 (CNRVC190247_03168) | 355424..355741 | + | 318 | WP_032477342.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| OC536_RS15900 (CNRVC190247_03169) | 355942..356223 | + | 282 | WP_000086649.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OC536_RS15905 (CNRVC190247_03170) | 356220..356507 | + | 288 | WP_000869999.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OC536_RS15910 (CNRVC190247_03171) | 356662..357159 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| OC536_RS15915 (CNRVC190247_03172) | 357156..357428 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| OC536_RS15920 | 357817..357957 | + | 141 | WP_001952202.1 | DUF645 family protein | - |
| OC536_RS15925 (CNRVC190247_03173) | 358204..358542 | + | 339 | WP_050503336.1 | hypothetical protein | - |
| OC536_RS15930 (CNRVC190247_03174) | 358709..359245 | + | 537 | WP_000469478.1 | GNAT family protein | - |
| OC536_RS15935 (CNRVC190247_03175) | 359416..359778 | + | 363 | WP_000391481.1 | DUF6232 family protein | - |
| OC536_RS15940 (CNRVC190247_03177) | 359965..360201 | - | 237 | WP_000772125.1 | RNA-binding protein | - |
| OC536_RS15945 (CNRVC190247_03178) | 360437..360742 | + | 306 | WP_000064427.1 | hypothetical protein | - |
| OC536_RS15950 | 360799..360914 | + | 116 | Protein_354 | acetyltransferase | - |
| OC536_RS15955 | 361083..361188 | + | 106 | Protein_355 | DUF645 family protein | - |
| OC536_RS15960 | 361308..361523 | + | 216 | WP_080284764.1 | DUF3709 domain-containing protein | - |
| OC536_RS15965 | 361535..361753 | + | 219 | Protein_357 | DUF3709 domain-containing protein | - |
| OC536_RS15970 | 362181..362360 | + | 180 | WP_001908899.1 | DUF645 family protein | - |
| OC536_RS15975 | 362715..362852 | + | 138 | WP_002022145.1 | DUF645 family protein | - |
| OC536_RS15980 | 363308..363370 | + | 63 | Protein_360 | DUF645 family protein | - |
| OC536_RS15985 | 363342..363458 | + | 117 | WP_232510684.1 | Tfp pilus assembly protein | - |
| OC536_RS15990 | 363814..363967 | + | 154 | Protein_362 | DUF645 family protein | - |
| OC536_RS15995 | 364324..364487 | + | 164 | Protein_363 | DUF645 family protein | - |
| OC536_RS16000 (CNRVC190247_03179) | 364743..364973 | - | 231 | WP_000838533.1 | PAS factor family protein | - |
| OC536_RS16005 | 365112..365174 | + | 63 | Protein_365 | acetyltransferase | - |
| OC536_RS16010 (CNRVC190247_03180) | 365407..366534 | + | 1128 | WP_262102102.1 | ISAs1 family transposase IS1358 | Transposase |
| OC536_RS16015 | 366567..366826 | + | 260 | Protein_367 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OC536_RS16020 (CNRVC190247_03181) | 366813..367127 | + | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | - |
| OC536_RS16025 (CNRVC190247_03182) | 367266..368039 | + | 774 | WP_032471917.1 | aminoglycoside phosphotransferase family protein | - |
| OC536_RS16030 (CNRVC190247_03183) | 368249..368503 | + | 255 | WP_001223794.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| OC536_RS16035 (CNRVC190247_03184) | 368496..368759 | + | 264 | WP_000098715.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| OC536_RS16040 | 369130..369177 | + | 48 | Protein_372 | DUF645 family protein | - |
| OC536_RS16045 | 369182..369271 | + | 90 | WP_229598405.1 | Tfp pilus assembly protein | - |
| OC536_RS16050 | 369459..369962 | + | 504 | WP_262102103.1 | hypothetical protein | - |
| OC536_RS16055 | 369969..370031 | + | 63 | Protein_375 | acetyltransferase | - |
| OC536_RS16060 (CNRVC190247_03185) | 370058..370597 | + | 540 | WP_248431594.1 | isochorismatase family protein | - |
| OC536_RS16065 (CNRVC190247_03186) | 370732..371220 | + | 489 | WP_114717217.1 | dual specificity protein phosphatase family protein | - |
| OC536_RS16070 (CNRVC190247_03187) | 371395..372267 | + | 873 | WP_000254717.1 | DUF3800 domain-containing protein | - |
| OC536_RS16075 (CNRVC190247_03188) | 372418..372741 | + | 324 | WP_000248693.1 | DUF4144 domain-containing protein | - |
| OC536_RS16080 (CNRVC190247_03189) | 372889..373362 | + | 474 | WP_153734401.1 | hypothetical protein | - |
| OC536_RS16085 (CNRVC190247_03191) | 373405..374582 | + | 1178 | WP_086010043.1 | IS3 family transposase | - |
| OC536_RS16090 (CNRVC190247_03192) | 374591..374812 | - | 222 | Protein_382 | GNAT family N-acetyltransferase | - |
| OC536_RS16095 (CNRVC190247_03193) | 374809..375081 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | - |
| OC536_RS16100 (CNRVC190247_03194) | 375379..375630 | + | 252 | WP_032477085.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OC536_RS16105 (CNRVC190247_03195) | 375620..375907 | + | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OC536_RS16110 | 375938..376108 | - | 171 | Protein_386 | IS30 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|