MGE detailed information
MGE type: Conjugative plasmid MGE length: 86328 bp
Accession: NZ_LT963393 Location: 1..86328 Organism: Pseudomonas syringae pv. cerasicola isolate CFBP6109 Replicon: plasmid PP2
Accession: NZ_LT963393 Location: 1..86328 Organism: Pseudomonas syringae pv. cerasicola isolate CFBP6109 Replicon: plasmid PP2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H44_RS29405 () | 514..741 | + | 228 | Protein_1 | DUF4113 domain-containing protein | - |
| C6H44_RS29410 () | 841..1161 | + | 321 | WP_057459527.1 | addiction module antitoxin RelB | - |
| C6H44_RS29415 () | 1158..1628 | + | 471 | WP_057459528.1 | putative addiction module antidote protein | - |
| C6H44_RS29425 () | 2465..3001 | - | 537 | Protein_4 | Methyl-accepting chemotaxis protein CtpH | VF |
| C6H44_RS29430 () | 3089..4066 | + | 978 | WP_032701292.1 | IS5 family transposase IS52 | Transposase |
| C6H44_RS29435 () | 4510..4704 | + | 195 | Protein_6 | hypothetical protein | - |
| C6H44_RS29440 () | 4752..5087 | - | 336 | Protein_7 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| C6H44_RS29450 () | 5266..6495 | - | 1230 | WP_104725427.1 | IS91 family transposase IS801 | Transposase |
| C6H44_RS29455 () | 6476..6757 | - | 282 | WP_057403871.1 | hypothetical protein | - |
| C6H44_RS29460 () | 7171..7851 | - | 681 | WP_134931022.1 | hypothetical protein | - |
| C6H44_RS29465 () | 8164..8751 | - | 588 | WP_080395855.1 | hypothetical protein | - |
| C6H44_RS29470 () | 8762..9157 | - | 396 | WP_060411143.1 | CesT family type III secretion system chaperone | - |
| C6H44_RS29475 () | 9458..10435 | - | 978 | WP_032701292.1 | IS5 family transposase IS52 | Transposase |
| C6H44_RS29480 () | 10855..11166 | - | 312 | WP_053486599.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6H44_RS29485 () | 11163..11414 | - | 252 | WP_004643047.1 | antitoxin | - |
| C6H44_RS29490 () | 11729..13188 | + | 1460 | Protein_16 | hypothetical protein | VF |
| C6H44_RS29495 () | 13393..14370 | + | 978 | WP_032701292.1 | IS5 family transposase IS52 | Transposase |
| C6H44_RS29500 () | 14600..15012 | + | 413 | Protein_18 | recombinase family protein | - |
| C6H44_RS29505 () | 15059..16281 | + | 1223 | WP_104725400.1 | IS3 family transposase IS51 | Transposase |
| C6H44_RS29510 () | 16320..16544 | + | 225 | Protein_20 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H44_RS29520 () | 17098..24027 | + | 6930 | WP_104725466.1 | type III effector protein XopAD | - |
| C6H44_RS29525 () | 24213..25442 | + | 1230 | WP_104725427.1 | IS91 family transposase IS801 | Transposase |
| C6H44_RS29535 () | 25623..28390 | + | 2768 | Protein_23 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| C6H44_RS29540 () | 28431..28610 | + | 180 | Protein_24 | arylsulfatase regulator | - |
| C6H44_RS29545 () | 28750..29730 | + | 981 | WP_057403839.1 | IS5 family transposase ISPsy2 | Transposase |
| C6H44_RS29550 () | 29969..30370 | + | 402 | WP_054070877.1 | hypothetical protein | - |
| C6H44_RS29555 () | 30364..31062 | + | 699 | WP_044345848.1 | RES family NAD+ phosphorylase | - |
| C6H44_RS29560 () | 31357..31644 | - | 288 | WP_004667956.1 | HU family DNA-binding protein | - |
| C6H44_RS29565 () | 31869..33182 | - | 1314 | WP_060411007.1 | replication initiation protein | - |
| C6H44_RS29570 () | 33581..33808 | - | 228 | WP_004666953.1 | hypothetical protein | - |
| C6H44_RS29575 () | 33825..34727 | - | 903 | WP_057460179.1 | hypothetical protein | - |
| C6H44_RS29585 () | 35081..35509 | - | 429 | WP_057460178.1 | winged helix-turn-helix domain-containing protein | - |
| C6H44_RS29590 () | 36080..36319 | - | 240 | WP_004666950.1 | hypothetical protein | - |
| C6H44_RS29595 () | 36384..40158 | - | 3775 | Protein_34 | hypothetical protein | Relaxase |
| C6H44_RS29600 () | 40148..40873 | - | 726 | WP_057459048.1 | relaxosome protein | - |
| C6H44_RS29605 () | 41209..41628 | + | 420 | WP_046835441.1 | hypothetical protein | - |
| C6H44_RS29610 () | 41647..42219 | - | 573 | WP_046835440.1 | hypothetical protein | - |
| C6H44_RS29615 () | 42216..42935 | - | 720 | WP_057459047.1 | hypothetical protein | - |
| C6H44_RS29620 () | 43245..43850 | - | 606 | WP_057459046.1 | single-stranded DNA-binding protein | - |
| C6H44_RS29625 () | 43878..44162 | - | 285 | WP_057459045.1 | hypothetical protein | - |
| C6H44_RS29630 () | 44189..46354 | - | 2166 | WP_060411008.1 | type IA DNA topoisomerase | - |
| C6H44_RS29635 () | 46382..46744 | - | 363 | WP_015060690.1 | IncN plasmid killer protein | - |
| C6H44_RS29640 () | 46785..48446 | - | 1662 | WP_099315801.1 | Conjugal transfer protein TraG | VF |
| C6H44_RS29645 () | 48446..48679 | - | 234 | WP_099315803.1 | hypothetical protein | - |
| C6H44_RS29650 () | 48857..49861 | - | 1005 | WP_057460631.1 | hypothetical protein | - |
| C6H44_RS29655 () | 49897..50121 | - | 225 | WP_057460630.1 | hypothetical protein | VF |
| C6H44_RS29660 () | 50121..50354 | - | 234 | WP_060411043.1 | hypothetical protein | - |
| C6H44_RS29665 () | 50468..50761 | - | 294 | WP_057455877.1 | hypothetical protein | - |
| C6H44_RS29670 () | 50758..51048 | - | 291 | WP_057459116.1 | hypothetical protein | - |
| C6H44_RS29675 () | 51122..51487 | - | 366 | WP_054999222.1 | hypothetical protein | - |
| C6H44_RS29680 () | 51472..51858 | - | 387 | WP_060411173.1 | hypothetical protein | - |
| C6H44_RS29685 () | 51872..52927 | - | 1056 | WP_060411362.1 | Type IV secretion system protein VirB11 | VF |
| C6H44_RS29690 () | 52937..54272 | - | 1336 | Protein_53 | hypothetical protein | VF |
| C6H44_RS29695 () | 54259..55068 | - | 810 | WP_057458819.1 | P-type conjugative transfer protein VirB9 | - |
| C6H44_RS29700 () | 55058..55846 | - | 789 | WP_099277231.1 | type IV secretion system protein | - |
| C6H44_RS29705 () | 55883..56185 | - | 303 | WP_080395730.1 | conjugal transfer protein | - |
| C6H44_RS29710 () | 56254..57198 | - | 945 | WP_004666686.1 | type IV secretion system protein | - |
| C6H44_RS29715 () | 57225..57431 | - | 207 | WP_044322543.1 | hypothetical protein | - |
| C6H44_RS29720 () | 57446..58126 | - | 681 | WP_057459622.1 | P-type DNA transfer protein VirB5 | - |
| C6H44_RS29725 () | 58123..60675 | - | 2553 | WP_173645201.1 | conjugal transfer protein | - |
| C6H44_RS29730 () | 60611..61012 | - | 402 | Protein_61 | VirB3 family type IV secretion system protein | - |
| C6H44_RS29735 () | 61025..61360 | - | 336 | WP_057459626.1 | hypothetical protein | - |
| C6H44_RS29740 () | 61360..62067 | - | 708 | WP_099315812.1 | Type IV secretion system protein virB1 | VF |
| C6H44_RS29745 () | 62187..63164 | + | 978 | WP_032701292.1 | IS5 family transposase IS52 | Transposase |
| C6H44_RS29750 () | 63280..63963 | + | 684 | WP_017699206.1 | hypothetical protein | - |
| C6H44_RS29755 () | 64001..64111 | - | 111 | Protein_66 | helix-turn-helix domain-containing protein | - |
| C6H44_RS29760 () | 64155..66185 | - | 2031 | WP_057460211.1 | hypothetical protein | - |
| C6H44_RS29780 () | 67052..67672 | - | 621 | WP_005747119.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H44_RS29785 () | 67908..68246 | + | 339 | WP_054071658.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6H44_RS29790 () | 68246..68533 | + | 288 | WP_005622028.1 | helix-turn-helix domain-containing protein | - |
| C6H44_RS29795 () | 68595..69011 | + | 417 | WP_057458731.1 | hypothetical protein | - |
| C6H44_RS29805 () | 69471..69820 | + | 350 | Protein_72 | hypothetical protein | - |
| C6H44_RS29810 () | 69867..70717 | + | 851 | Protein_73 | DUF945 domain-containing protein | - |
| C6H44_RS29815 () | 70775..70963 | + | 189 | WP_007247499.1 | hypothetical protein | - |
| C6H44_RS29820 () | 71038..71316 | - | 279 | WP_057458732.1 | mobilization protein | - |
| C6H44_RS29830 () | 71755..72036 | - | 282 | WP_044322491.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H44_RS29835 () | 72036..72224 | - | 189 | WP_002556028.1 | hypothetical protein | Antitoxin Detail |
| C6H44_RS29840 () | 72401..73039 | - | 639 | WP_060411316.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H44_RS29850 () | 74504..75481 | + | 978 | WP_032701292.1 | IS5 family transposase IS52 | Transposase |
| C6H44_RS29855 () | 75850..76131 | + | 282 | WP_019742102.1 | DUF1778 domain-containing protein | - |
| C6H44_RS29860 () | 76128..76637 | + | 510 | WP_054088148.1 | GNAT family N-acetyltransferase | - |
| C6H44_RS29865 () | 76667..76897 | - | 231 | WP_019742104.1 | hypothetical protein | - |
| C6H44_RS29870 () | 76894..77523 | - | 630 | WP_057452751.1 | Sporulation initiation inhibitor protein Soj | VF |
| C6H44_RS29880 () | 77912..78457 | + | 546 | Protein_85 | IS21 family transposase ISPsy4 | Transposase |
| C6H44_RS29885 () | 78459..79223 | + | 765 | Protein_86 | IS5 family transposase ISPsy2 | Transposase |
| C6H44_RS29895 () | 79683..81632 | - | 1950 | WP_104725465.1 | hypothetical protein | VF |
| C6H44_RS29900 () | 82204..83238 | - | 1035 | WP_057460066.1 | IS110 family transposase ISPsy16 | Transposase |
| C6H44_RS29910 () | 83890..84963 | - | 1074 | WP_104725406.1 | IS630 family transposase ISPsy1 | Transposase |
| C6H44_RS29915 () | 85507..85794 | + | 288 | WP_004667956.1 | HU family DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|