MGE detailed information
MGE type: IS/Tn MGE length: 1041 bp
Accession: NZ_LS997868 Location: 557632..558672 Organism: Vibrio cholerae strain NCTC 30 Replicon: chromosome
Accession: NZ_LS997868 Location: 557632..558672 Organism: Vibrio cholerae strain NCTC 30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5R51_RS16385 () | 552871..553032 | + | 162 | WP_142618381.1 | DUF3709 domain-containing protein | - |
| D5R51_RS16390 () | 553026..553274 | + | 249 | WP_082069824.1 | DUF3709 domain-containing protein | - |
| D5R51_RS16400 () | 553611..554681 | + | 1071 | WP_119091929.1 | hypothetical protein | - |
| D5R51_RS16410 () | 554734..554940 | + | 207 | Protein_514 | DUF3709 domain-containing protein | - |
| D5R51_RS16415 () | 554934..555182 | + | 249 | WP_162892165.1 | DUF3709 domain-containing protein | - |
| D5R51_RS19090 () | 555630..555744 | + | 115 | Protein_516 | ggdef family protein | - |
| D5R51_RS16430 () | 555763..555801 | + | 39 | WP_119092150.1 | hypothetical protein | - |
| D5R51_RS16440 () | 556044..556457 | + | 414 | WP_000049421.1 | VOC family protein | - |
| D5R51_RS16455 () | 556683..557597 | + | 915 | WP_119091933.1 | alpha/beta hydrolase | - |
| D5R51_RS16460 () | 557632..558672 | - | 1041 | WP_119091934.1 | IS481 family transposase ISVvu4 | Transposase |
| D5R51_RS16470 () | 559212..559372 | + | 161 | Protein_521 | hypothetical protein | - |
| D5R51_RS16475 () | 559393..559563 | + | 171 | WP_113600562.1 | DUF3709 domain-containing protein | - |
| D5R51_RS16480 () | 559848..560032 | + | 185 | Protein_523 | DUF3709 domain-containing protein | - |
| D5R51_RS16485 () | 560029..560262 | + | 234 | WP_119091935.1 | DUF3709 domain-containing protein | - |
| D5R51_RS19005 () | 560698..560868 | + | 171 | Protein_525 | DUF645 family protein | - |
| D5R51_RS16500 () | 561067..561345 | - | 279 | WP_119091936.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D5R51_RS16505 () | 561342..561626 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| D5R51_RS16510 () | 561876..562133 | + | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D5R51_RS16515 () | 562121..562423 | + | 303 | WP_000229322.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D5R51_RS16520 () | 562737..562919 | + | 183 | WP_119091920.1 | DUF645 family protein | - |
| D5R51_RS16525 () | 563137..563493 | + | 357 | WP_002033264.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|