MGE detailed information
MGE type: Genomic_island MGE length: 25617 bp
Accession: NZ_LS483303 Location: 4156084..4181700 Organism: Escherichia coli strain NCTC9967 Replicon: chromosome
Accession: NZ_LS483303 Location: 4156084..4181700 Organism: Escherichia coli strain NCTC9967 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM88_RS21285 () | 4151850..4152206 | - | 357 | WP_032165636.1 | Arm DNA-binding domain-containing protein | - |
| DQM88_RS21290 () | 4152256..4154169 | - | 1914 | WP_111738663.1 | DUF927 domain-containing protein | - |
| DQM88_RS21295 () | 4154255..4155565 | - | 1311 | WP_032319212.1 | site-specific integrase | - |
| DQM88_RS21300 () | 4156084..4156437 | + | 354 | WP_053287389.1 | hypothetical protein | - |
| DQM88_RS21305 () | 4156430..4156861 | + | 432 | WP_052238989.1 | hypothetical protein | - |
| DQM88_RS21310 () | 4156908..4157336 | + | 429 | WP_023892868.1 | DUF2787 family protein | - |
| DQM88_RS21315 () | 4157395..4157859 | + | 465 | WP_023892867.1 | lecithin retinol acyltransferase family protein | - |
| DQM88_RS21320 () | 4157838..4158077 | + | 240 | WP_000113424.1 | DeoR family transcriptional regulator | - |
| DQM88_RS21325 () | 4158155..4158538 | + | 384 | WP_064669692.1 | hypothetical protein | - |
| DQM88_RS21330 () | 4158682..4159431 | + | 750 | WP_029403631.1 | DUF3944 domain-containing protein | - |
| DQM88_RS21335 () | 4159534..4160247 | + | 714 | WP_023205801.1 | WYL domain-containing protein | - |
| DQM88_RS21340 () | 4160306..4160617 | + | 312 | WP_023337782.1 | hypothetical protein | - |
| DQM88_RS21345 () | 4160688..4160915 | + | 228 | Protein_3896 | DUF262 domain-containing protein | - |
| DQM88_RS21350 () | 4160931..4161628 | - | 698 | Protein_3897 | IS1 family transposase IS1R | Transposase |
| DQM88_RS21360 () | 4161684..4161935 | + | 252 | Protein_3898 | IS200/IS605 family transposase | - |
| DQM88_RS21365 () | 4162127..4162321 | - | 195 | WP_015060486.1 | hypothetical protein | - |
| DQM88_RS21370 () | 4162623..4163320 | - | 698 | Protein_3900 | IS1 family transposase IS1G | Transposase |
| DQM88_RS21375 () | 4163376..4165127 | + | 1752 | Protein_3901 | Outer membrane usher protein PapC | VF |
| DQM88_RS21380 () | 4165149..4165898 | + | 750 | WP_001352149.1 | Chaperone protein PapD | VF |
| DQM88_RS21385 () | 4165900..4166964 | + | 1065 | WP_001269817.1 | fimbrial protein | - |
| DQM88_RS21390 () | 4167007..4167207 | - | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| DQM88_RS21395 () | 4167476..4168069 | + | 594 | WP_000599943.1 | DUF1449 family protein | - |
| DQM88_RS21405 () | 4168103..4168800 | + | 698 | Protein_3906 | IS1 family transposase IS1R | Transposase |
| DQM88_RS21410 () | 4168810..4170465 | + | 1656 | WP_096321104.1 | DUF262 domain-containing protein | - |
| DQM88_RS21415 () | 4170669..4172225 | + | 1557 | WP_096321105.1 | type I restriction-modification system subunit M | - |
| DQM88_RS21420 () | 4172222..4173400 | + | 1179 | WP_111738664.1 | restriction endonuclease subunit S | - |
| DQM88_RS21425 () | 4173521..4176637 | + | 3117 | WP_111738665.1 | HsdR family type I site-specific deoxyribonuclease | - |
| DQM88_RS21430 () | 4176662..4177828 | + | 1167 | WP_111738666.1 | hypothetical protein | - |
| DQM88_RS21440 () | 4178675..4180213 | + | 1539 | Protein_3912 | lysine decarboxylation/transport transcriptional activator CadC | - |
| DQM88_RS21450 () | 4180411..4181108 | - | 698 | Protein_3913 | IS1 family transposase | - |
| DQM88_RS21460 () | 4181203..4181376 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| DQM88_RS21465 () | 4181404..4181700 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| DQM88_RS21475 () | 4181927..4182199 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| DQM88_RS21480 () | 4182211..4182441 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| DQM88_RS21485 () | 4182622..4184253 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| DQM88_RS21490 () | 4184250..4184969 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|