MGE detailed information
MGE type: Prophage MGE length: 35892 bp
Accession: NZ_LR898868 Location: 1907581..1943472 Organism: Escherichia coli isolate MSB1_1D-sc-2280324 Replicon: chromosome
Accession: NZ_LR898868 Location: 1907581..1943472 Organism: Escherichia coli isolate MSB1_1D-sc-2280324 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMX26_RS09095 () | 1903664..1904305 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JMX26_RS09100 () | 1904361..1905539 | - | 1179 | WP_000173449.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JMX26_RS09105 () | 1905673..1905963 | + | 291 | WP_115735510.1 | DNA damage-inducible protein YebG | - |
| JMX26_RS09110 () | 1906030..1906386 | + | 357 | WP_001295500.1 | protein YebF | - |
| JMX26_RS09115 () | 1906713..1907372 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| JMX26_RS09120 () | 1907581..1909641 | + | 2061 | WP_130053283.1 | oligopeptidase B | - |
| JMX26_RS09125 () | 1909638..1910300 | - | 663 | WP_130053282.1 | exodeoxyribonuclease X | - |
| JMX26_RS09130 () | 1910324..1910980 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| JMX26_RS09135 () | 1911082..1911312 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JMX26_RS09140 () | 1911451..1911825 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| JMX26_RS09145 () | 1911829..1912701 | + | 873 | WP_000879295.1 | copper homeostasis membrane protein CopD | - |
| JMX26_RS09150 () | 1912714..1913055 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 1913083..1913321 | - | 239 | - | - | Antitoxin Detail |
| - () | 1913213..1913316 | + | 104 | - | - | Toxin Detail |
| JMX26_RS09155 () | 1913394..1914479 | - | 1086 | WP_019076535.1 | hypothetical protein ; Integrase | Integrase |
| JMX26_RS09160 () | 1914448..1914720 | - | 273 | WP_003841650.1 | excisionase | - |
| JMX26_RS09165 () | 1914785..1915027 | - | 243 | WP_115735511.1 | DUF4060 family protein | - |
| JMX26_RS09170 () | 1915067..1916107 | - | 1041 | WP_115735512.1 | recombinase RecT | - |
| JMX26_RS09175 () | 1916122..1918650 | - | 2529 | Protein_1788 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| JMX26_RS09180 () | 1918790..1919487 | + | 698 | Protein_1789 | IS1 family transposase IS1S | Transposase |
| JMX26_RS09185 () | 1919422..1919688 | - | 267 | WP_181464078.1 | hypothetical protein | - |
| JMX26_RS09190 () | 1919710..1920327 | + | 618 | WP_113418152.1 | hypothetical protein | - |
| JMX26_RS09195 () | 1920324..1920704 | + | 381 | WP_000637185.1 | hypothetical protein | - |
| JMX26_RS09200 () | 1920688..1921869 | + | 1182 | Protein_1793 | baseplate J/gp47 family protein | - |
| JMX26_RS09205 () | 1921866..1922588 | + | 723 | WP_130053387.1 | DUF2612 domain-containing protein | - |
| JMX26_RS09210 () | 1922581..1922976 | + | 396 | Protein_1795 | carbohydrate-binding protein | - |
| JMX26_RS09215 () | 1923848..1924279 | + | 432 | WP_113418158.1 | tail fiber assembly protein | - |
| JMX26_RS09220 () | 1924585..1925472 | - | 888 | WP_130053390.1 | acyltransferase | - |
| JMX26_RS09225 () | 1925454..1925735 | - | 282 | WP_165369110.1 | acyltransferase family protein | - |
| JMX26_RS09235 () | 1927731..1928387 | + | 657 | WP_001705148.1 | protein-serine/threonine phosphatase | - |
| JMX26_RS09240 () | 1928388..1928579 | - | 192 | WP_001338167.1 | YebW family protein | - |
| JMX26_RS09245 () | 1928684..1928920 | - | 237 | WP_001338166.1 | DUF1480 family protein | - |
| JMX26_RS09250 () | 1929038..1930477 | - | 1440 | WP_001351758.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JMX26_RS09255 () | 1930557..1933190 | - | 2634 | WP_001297532.1 | Intermembrane transport protein YebT | VF |
| JMX26_RS09260 () | 1933159..1934442 | - | 1284 | WP_001207283.1 | membrane integrity lipid transport subunit YebS | - |
| JMX26_RS09265 () | 1934572..1935069 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| JMX26_RS09270 () | 1935166..1935864 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| JMX26_RS09275 () | 1935884..1937932 | + | 2049 | WP_001055779.1 | carboxy terminal-processing peptidase | - |
| JMX26_RS09280 () | 1938124..1939005 | + | 882 | WP_000984517.1 | protease HtpX | - |
| JMX26_RS09285 () | 1939051..1940424 | - | 1374 | WP_001351757.1 | MFS transporter | - |
| JMX26_RS09290 () | 1940601..1941392 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| JMX26_RS09295 () | 1941535..1941774 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| JMX26_RS09300 () | 1941933..1942076 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| JMX26_RS09305 () | 1942151..1942438 | + | 288 | WP_001006866.1 | YebO family protein | - |
| JMX26_RS09310 () | 1943107..1943250 | + | 144 | WP_001295496.1 | YobF family protein | - |
| JMX26_RS09315 () | 1943263..1943472 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JMX26_RS09320 () | 1943638..1944447 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JMX26_RS09325 () | 1944444..1945010 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| JMX26_RS09330 () | 1945439..1945897 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| JMX26_RS09335 () | 1945952..1946803 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| JMX26_RS09340 () | 1946816..1947616 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|