MGE detailed information
MGE type: Conjugative plasmid MGE length: 112822 bp
Accession: NZ_LR890694 Location: 1..112822 Organism: Escherichia coli isolate MSB1_4E-sc-2280348 Replicon: plasmid 2
Accession: NZ_LR890694 Location: 1..112822 Organism: Escherichia coli isolate MSB1_4E-sc-2280348 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW23_RS24565 () | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| JMW23_RS24570 () | 1263..2003 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| JMW23_RS24575 () | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| JMW23_RS24580 () | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| JMW23_RS24585 () | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| JMW23_RS24590 () | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| JMW23_RS24595 () | 5492..5928 | - | 437 | Protein_6 | IS3 family transposase IS2 | Transposase |
| JMW23_RS24600 () | 6210..8180 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| JMW23_RS24605 () | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| JMW23_RS24610 () | 9041..9292 | - | 252 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| JMW23_RS24615 () | 9319..10932 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| JMW23_RS24620 () | 10963..11313 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| JMW23_RS24625 () | 11310..11735 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| JMW23_RS24630 () | 11821..12189 | - | 369 | Protein_13 | IS66 family transposase ISEc22 | Transposase |
| JMW23_RS24635 () | 12257..13039 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| JMW23_RS24640 () | 13036..14058 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| JMW23_RS24645 () | 14144..15089 | - | 946 | Protein_16 | IS66 family transposase ISEc8 | Transposase |
| JMW23_RS24650 () | 15138..15485 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| JMW23_RS24655 () | 15482..15886 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| JMW23_RS24660 () | 15915..16298 | - | 384 | Protein_19 | IS3 family transposase IS629 | Transposase |
| JMW23_RS24665 () | 16388..17896 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| JMW23_RS24670 () | 18569..19308 | - | 740 | Protein_21 | IS3 family transposase IS629 | Transposase |
| JMW23_RS24675 () | 19334..19639 | + | 306 | Protein_22 | IS91 family transposase ISSbo1 | Transposase |
| JMW23_RS24680 () | 20162..21337 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| JMW23_RS24685 () | 21406..23667 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| JMW23_RS24690 () | 23836..24300 | - | 465 | Protein_25 | energy transducer TonB | - |
| JMW23_RS24695 () | 24354..25058 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| JMW23_RS24700 () | 25158..25430 | + | 273 | Protein_27 | DUF4158 domain-containing protein | - |
| JMW23_RS24705 () | 25498..26595 | - | 1098 | Protein_28 | TonB-dependent receptor | - |
| JMW23_RS24710 () | 26652..27620 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| JMW23_RS24715 () | 27655..28530 | - | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| JMW23_RS24720 () | 28785..29489 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JMW23_RS24725 () | 29555..30100 | + | 546 | Protein_32 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JMW23_RS24730 () | 30136..30551 | - | 416 | Protein_33 | IS1 family transposase | - |
| JMW23_RS24735 () | 30800..31201 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| JMW23_RS24740 () | 31134..31391 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| JMW23_RS24745 () | 31484..32146 | - | 663 | WP_001493766.1 | CPBP family intramembrane metalloprotease | - |
| JMW23_RS24750 () | 33085..33942 | - | 858 | WP_016240488.1 | incFII family plasmid replication initiator RepA | - |
| JMW23_RS24755 () | 33935..34009 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JMW23_RS24760 () | 34254..34502 | - | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| JMW23_RS24765 () | 34787..34936 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 34981..35040 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 34981..35040 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 34981..35040 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 34981..35040 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| JMW23_RS24770 () | 35183..35656 | - | 474 | WP_016240489.1 | hypothetical protein | - |
| JMW23_RS24775 () | 35811..36401 | - | 591 | WP_033807967.1 | DUF2726 domain-containing protein | - |
| JMW23_RS24780 () | 36439..36648 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| JMW23_RS24785 () | 36694..37155 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| JMW23_RS24790 () | 37400..37612 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| JMW23_RS24795 () | 37741..38301 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| JMW23_RS24800 () | 38404..39264 | - | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| JMW23_RS24805 () | 39323..40069 | - | 747 | WP_059338983.1 | conjugal transfer pilus acetylase TraX | - |
| JMW23_RS24810 () | 40089..45359 | - | 5271 | WP_201520425.1 | Multifunctional conjugation protein TraI | Relaxase |
| JMW23_RS24815 () | 45359..47575 | - | 2217 | WP_199213858.1 | type IV conjugative transfer system coupling protein TraD | - |
| JMW23_RS24820 () | 47626..48363 | - | 738 | WP_012881122.1 | hypothetical protein | - |
| JMW23_RS24825 () | 48566..49297 | - | 732 | WP_012881123.1 | complement resistance protein TraT | - |
| JMW23_RS24830 () | 49311..49820 | - | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| JMW23_RS24835 () | 49817..52642 | - | 2826 | WP_012881124.1 | conjugal transfer mating pair stabilization protein TraG | - |
| JMW23_RS24840 () | 52639..54012 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| JMW23_RS24845 () | 53999..54424 | - | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| JMW23_RS24850 () | 54372..54719 | - | 348 | WP_011666494.1 | P-type conjugative transfer protein TrbJ | - |
| JMW23_RS24855 () | 54649..55194 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JMW23_RS24860 () | 55181..55465 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JMW23_RS24865 () | 55546..55881 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| JMW23_RS24870 () | 55862..56203 | - | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| JMW23_RS24875 () | 56217..56960 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JMW23_RS24880 () | 56953..57210 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| JMW23_RS24885 () | 57237..59087 | - | 1851 | WP_117389471.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JMW23_RS24890 () | 59084..59722 | - | 639 | WP_015058995.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JMW23_RS24895 () | 59731..60036 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| JMW23_RS24900 () | 60066..61058 | - | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| JMW23_RS24905 () | 61055..61687 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| JMW23_RS24910 () | 61684..62070 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| JMW23_RS24915 () | 62067..64697 | - | 2631 | WP_000069772.1 | type IV secretion system protein TraC | - |
| JMW23_RS24920 () | 64823..65170 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| JMW23_RS24925 () | 65198..65416 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| JMW23_RS24930 () | 65515..65991 | - | 477 | WP_012881127.1 | hypothetical protein | - |
| JMW23_RS24935 () | 65984..66205 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| JMW23_RS24940 () | 66340..66855 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JMW23_RS24945 () | 66852..67220 | - | 369 | WP_001681801.1 | conjugal transfer protein TrbD | - |
| JMW23_RS24950 () | 67159..67749 | - | 591 | WP_012881129.1 | conjugal transfer protein TraP | - |
| JMW23_RS24955 () | 67739..69166 | - | 1428 | WP_012881130.1 | conjugal transfer protein TraB | - |
| JMW23_RS24960 () | 69166..69894 | - | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| JMW23_RS24965 () | 69881..70447 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| JMW23_RS24970 () | 70469..70780 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| JMW23_RS24975 () | 70795..71157 | - | 363 | WP_012881131.1 | type IV conjugative transfer system pilin TraA | - |
| JMW23_RS24980 () | 71191..71430 | - | 240 | WP_042018283.1 | conjugal transfer relaxosome protein TraY | - |
| JMW23_RS24985 () | 71538..72185 | - | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| JMW23_RS24990 () | 72377..72760 | - | 384 | WP_001151529.1 | relaxosome protein TraM | - |
| JMW23_RS24995 () | 73093..73683 | + | 591 | WP_000252683.1 | hypothetical protein | VF |
| JMW23_RS25000 () | 73980..74801 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| JMW23_RS25005 () | 74912..75208 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| JMW23_RS25010 () | 75600..75804 | + | 205 | Protein_89 | pilus protein | - |
| JMW23_RS25015 () | 76105..76263 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 76307..76531 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 76307..76531 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 76307..76531 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 76307..76531 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| JMW23_RS25020 () | 76343..76522 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| JMW23_RS25025 () | 76543..77262 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| JMW23_RS25030 () | 77259..77693 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| JMW23_RS25035 () | 77762..79726 | - | 1965 | WP_117389470.1 | ParB/RepB/Spo0J family partition protein | - |
| JMW23_RS25040 () | 79787..80020 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| JMW23_RS25045 () | 80078..80563 | - | 486 | WP_031311812.1 | single-stranded DNA-binding protein | - |
| JMW23_RS25050 () | 80713..82614 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| JMW23_RS25055 () | 83568..84029 | + | 462 | WP_064551502.1 | hypothetical protein | - |
| JMW23_RS25060 () | 84115..84678 | - | 564 | WP_016240496.1 | class I SAM-dependent methyltransferase | - |
| JMW23_RS25065 () | 84725..86086 | - | 1362 | WP_025746315.1 | DUF3560 domain-containing protein | - |
| JMW23_RS25070 () | 86138..86368 | - | 231 | WP_000218644.1 | hypothetical protein | - |
| JMW23_RS25075 () | 86884..87132 | + | 249 | WP_071587243.1 | hypothetical protein | - |
| JMW23_RS25080 () | 87411..87602 | - | 192 | WP_001027511.1 | hypothetical protein | - |
| JMW23_RS25085 () | 87599..88021 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| JMW23_RS25090 () | 88068..88370 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| JMW23_RS25095 () | 88910..89686 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| JMW23_RS25100 () | 89737..90171 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| JMW23_RS25105 () | 90185..90406 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| JMW23_RS25110 () | 90407..91090 | - | 684 | WP_000086185.1 | DNA methylase | - |
| JMW23_RS25115 () | 91167..91471 | - | 305 | Protein_110 | hypothetical protein | - |
| JMW23_RS25120 () | 91475..92377 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| JMW23_RS25125 () | 93244..94215 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JMW23_RS25130 () | 94215..95381 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| JMW23_RS25135 () | 95969..96724 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| JMW23_RS25140 () | 97498..98304 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| JMW23_RS25145 () | 98305..98610 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JMW23_RS25150 () | 98612..98830 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JMW23_RS25155 () | 99538..100533 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| JMW23_RS25160 () | 100537..101469 | + | 933 | WP_000991832.1 | hypothetical protein | - |
| JMW23_RS25165 () | 101606..102303 | - | 698 | Protein_120 | IS1 family transposase IS1G | Transposase |
| JMW23_RS25170 () | 102332..103747 | - | 1416 | WP_100498477.1 | type I restriction-modification system subunit M | - |
| JMW23_RS25175 () | 103930..104151 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JMW23_RS25180 () | 104151..104531 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| JMW23_RS25185 () | 104536..104715 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| JMW23_RS25190 () | 104743..105102 | + | 360 | WP_001513660.1 | hypothetical protein | - |
| JMW23_RS25195 () | 105026..105439 | + | 414 | Protein_126 | DDE-type integrase/transposase/recombinase | - |
| JMW23_RS25200 () | 105389..105706 | - | 318 | WP_001513659.1 | hypothetical protein | - |
| JMW23_RS25205 () | 105934..106950 | - | 1017 | WP_012372828.1 | IS5 family transposase IS5D | Transposase |
| JMW23_RS25210 () | 107158..108561 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| JMW23_RS25215 () | 108548..109480 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| JMW23_RS25220 () | 109589..109918 | - | 330 | Protein_131 | TOBE domain-containing protein | - |
| JMW23_RS25225 () | 109934..110631 | - | 698 | Protein_132 | IS1 family transposase IS1R | Transposase |
| JMW23_RS25230 () | 110689..110937 | + | 249 | Protein_133 | abortive infection family protein | - |
| JMW23_RS25235 () | 111306..112037 | - | 732 | WP_001617898.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|