MGE detailed information
MGE type: Conjugative plasmid MGE length: 89833 bp
Accession: NZ_LR890609 Location: 1..89833 Organism: Escherichia coli isolate MINF_8D-sc-2280460 Replicon: plasmid 4
Accession: NZ_LR890609 Location: 1..89833 Organism: Escherichia coli isolate MINF_8D-sc-2280460 Replicon: plasmid 4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW69_RS24675 () | 1..873 | + | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| JMW69_RS24680 () | 1778..2062 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| JMW69_RS24685 () | 2062..2337 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JMW69_RS24690 () | 2502..2783 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| JMW69_RS24695 () | 2974..3240 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| JMW69_RS24700 () | 3378..3980 | - | 603 | WP_000521606.1 | hypothetical protein | - |
| JMW69_RS24705 () | 4156..5208 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| JMW69_RS24710 () | 5421..6011 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| JMW69_RS24715 () | 6011..6265 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| JMW69_RS24720 () | 6533..8032 | + | 1500 | WP_001542563.1 | RES family NAD+ phosphorylase | - |
| JMW69_RS24725 () | 8057..8920 | - | 864 | WP_000654832.1 | hypothetical protein | - |
| JMW69_RS24730 () | 9444..9758 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| JMW69_RS24735 () | 9811..10590 | + | 780 | WP_000535297.1 | hypothetical protein | - |
| JMW69_RS24740 () | 10641..11420 | + | 780 | WP_001302707.1 | site-specific integrase | - |
| JMW69_RS24745 () | 11558..11833 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| JMW69_RS24750 () | 11827..12471 | - | 645 | WP_000633913.1 | AAA family ATPase | - |
| JMW69_RS24755 () | 12700..13671 | + | 972 | WP_063269679.1 | plasmid segregation protein parM | - |
| JMW69_RS24760 () | 13676..14068 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| JMW69_RS24765 () | 14073..15344 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| JMW69_RS24770 () | 15344..15781 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JMW69_RS24775 () | 15778..16026 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| JMW69_RS24780 () | 16445..17347 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| JMW69_RS24785 () | 17344..17656 | + | 313 | Protein_22 | hypothetical protein | - |
| JMW69_RS24790 () | 17732..18415 | + | 684 | WP_000086137.1 | DNA methylase | - |
| JMW69_RS24795 () | 18416..18637 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| JMW69_RS24800 () | 18651..19085 | + | 435 | WP_000274421.1 | DUF1380 family protein | - |
| JMW69_RS24805 () | 19130..19900 | + | 771 | WP_141086666.1 | hypothetical protein | - |
| JMW69_RS24810 () | 20438..20740 | + | 303 | WP_072105978.1 | antirestriction protein | - |
| JMW69_RS24815 () | 20787..21209 | + | 423 | WP_000271732.1 | DUF1380 family protein | - |
| JMW69_RS24820 () | 21206..21397 | + | 192 | WP_001024838.1 | hypothetical protein | - |
| JMW69_RS24825 () | 21468..21782 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| JMW69_RS24830 () | 22166..22693 | + | 528 | WP_021532391.1 | single-stranded DNA-binding protein | - |
| JMW69_RS24835 () | 22751..22984 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| JMW69_RS24840 () | 23043..25001 | + | 1959 | WP_097507768.1 | ParB/RepB/Spo0J family partition protein | - |
| JMW69_RS24845 () | 25056..25490 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| JMW69_RS24850 () | 25487..26206 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| JMW69_RS24855 () | 26203..26799 | + | 597 | WP_000977998.1 | hypothetical protein | - |
| JMW69_RS24860 () | 27261..27761 | + | 501 | WP_014065718.1 | antirestriction protein ArdA | - |
| JMW69_RS24865 () | 28494..28928 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| JMW69_RS24870 () | 29021..29287 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| JMW69_RS24875 () | 29464..29853 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| JMW69_RS24880 () | 29850..30764 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| JMW69_RS24885 () | 30764..31009 | + | 246 | WP_021577253.1 | hypothetical protein | - |
| JMW69_RS24890 () | 31040..31291 | - | 252 | WP_000148280.1 | helix-turn-helix domain-containing protein | - |
| JMW69_RS24895 () | 31325..31522 | - | 198 | WP_024189120.1 | hypothetical protein | - |
| JMW69_RS24900 () | 31870..32718 | + | 849 | WP_001077044.1 | DUF4942 domain-containing protein | - |
| JMW69_RS24905 () | 32804..33139 | - | 336 | WP_000157083.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| JMW69_RS24910 () | 33372..33704 | + | 333 | WP_001291057.1 | hypothetical protein | - |
| JMW69_RS24915 () | 33716..36436 | + | 2721 | WP_065552752.1 | Protein TraI | Relaxase |
| JMW69_RS24920 () | 36657..38957 | - | 2301 | WP_013307869.1 | TraM recognition domain-containing protein | - |
| JMW69_RS24925 () | 38938..40062 | - | 1125 | WP_000152382.1 | DsbC family protein | - |
| JMW69_RS24930 () | 40059..41375 | - | 1317 | WP_001401585.1 | IncI1-type conjugal transfer protein TrbA | - |
| JMW69_RS24935 () | 42016..42267 | + | 252 | WP_001081067.1 | hypothetical protein | - |
| JMW69_RS24940 () | 42330..42506 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| JMW69_RS24945 () | 42656..43123 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| JMW69_RS24950 () | 43282..43905 | + | 624 | WP_001155247.1 | DNA-binding protein | - |
| JMW69_RS24955 () | 44103..44318 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| JMW69_RS24960 () | 44322..44690 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| JMW69_RS24965 () | 44981..45223 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| JMW69_RS24970 () | 45553..45705 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| JMW69_RS24975 () | 45843..47429 | - | 1587 | WP_000004564.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| JMW69_RS24980 () | 47703..48356 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JMW69_RS24985 () | 48444..50609 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| JMW69_RS24990 () | 50684..51253 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| JMW69_RS24995 () | 51250..52455 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| JMW69_RS25000 () | 52413..53033 | - | 621 | WP_102166911.1 | conjugal transfer protein TraV | - |
| JMW69_RS25005 () | 53033..56077 | - | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| JMW69_RS25010 () | 56372..57190 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| JMW69_RS25015 () | 57105..57356 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| JMW69_RS25020 () | 57413..57811 | - | 399 | WP_000088812.1 | hypothetical protein | - |
| JMW69_RS25025 () | 57858..58385 | - | 528 | WP_001407937.1 | conjugal transfer protein TraQ | - |
| JMW69_RS25030 () | 58385..59098 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| JMW69_RS25035 () | 59095..60432 | - | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| JMW69_RS25040 () | 60436..61410 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| JMW69_RS25045 () | 61421..62116 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| JMW69_RS25050 () | 62128..62478 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| JMW69_RS25055 () | 62495..66556 | - | 4062 | WP_013307874.1 | DNA primase | - |
| JMW69_RS25060 () | 66910..67491 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| JMW69_RS25065 () | 67723..68013 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| JMW69_RS25070 () | 68010..69158 | - | 1149 | WP_013307876.1 | putative protein YggR | VF |
| JMW69_RS25075 () | 69142..69978 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| JMW69_RS25080 () | 69975..70433 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| JMW69_RS25085 () | 70537..71739 | - | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| JMW69_RS25090 () | 71841..72662 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| JMW69_RS25095 () | 72875..73999 | - | 1125 | WP_013307880.1 | site-specific integrase | - |
| JMW69_RS25100 () | 74096..74293 | + | 198 | WP_001356717.1 | hypothetical protein | - |
| JMW69_RS25105 () | 74675..74914 | + | 240 | WP_000271302.1 | hypothetical protein | - |
| JMW69_RS25110 () | 74919..75296 | - | 378 | WP_052972533.1 | phage tail protein | - |
| JMW69_RS25115 () | 75622..76857 | - | 1236 | WP_085008799.1 | hypothetical protein | VF |
| JMW69_RS25120 () | 76875..77501 | - | 627 | WP_013307883.1 | prepilin peptidase | - |
| JMW69_RS25125 () | 77517..78002 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| JMW69_RS25130 () | 78047..78583 | - | 537 | WP_000111521.1 | hypothetical protein | VF |
| JMW69_RS25135 () | 78645..79739 | - | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JMW69_RS25140 () | 79741..81249 | - | 1509 | WP_102166913.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| JMW69_RS25145 () | 81352..81810 | - | 459 | WP_000095887.1 | hypothetical protein | VF |
| JMW69_RS25150 () | 81800..83095 | - | 1296 | WP_000129885.1 | type 4b pilus protein PilO2 | - |
| JMW69_RS25155 () | 83116..84735 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| JMW69_RS25160 () | 84767..85204 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| JMW69_RS25165 () | 85208..86278 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| JMW69_RS25170 () | 86519..86839 | - | 321 | WP_001447108.1 | hypothetical protein | - |
| JMW69_RS25175 () | 86955..87272 | - | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| JMW69_RS25180 () | 87278..87421 | - | 144 | WP_072105535.1 | hypothetical protein | - |
| JMW69_RS25185 () | 87688..88350 | - | 663 | WP_005082527.1 | hypothetical protein | - |
| JMW69_RS25190 () | 88490..89131 | - | 642 | WP_021515453.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|