MGE detailed information
MGE type: Prophage MGE length: 26409 bp
Accession: NZ_LR890606 Location: 2337545..2363953 Organism: Escherichia coli isolate MINF_8D-sc-2280460 Replicon: chromosome
Accession: NZ_LR890606 Location: 2337545..2363953 Organism: Escherichia coli isolate MINF_8D-sc-2280460 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW69_RS11120 () | 2332796..2333506 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JMW69_RS11125 () | 2333509..2334069 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JMW69_RS11130 () | 2334104..2334445 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| JMW69_RS11135 () | 2334580..2334906 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| JMW69_RS11140 () | 2335112..2336326 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| JMW69_RS11145 () | 2336338..2337357 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| JMW69_RS11150 () | 2337415..2337525 | + | 111 | WP_072276620.1 | transporter | - |
| JMW69_RS11155 () | 2337545..2338825 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| JMW69_RS11160 () | 2338860..2339111 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| JMW69_RS11165 () | 2339184..2341166 | - | 1983 | Protein_2182 | 3'-5' exoribonuclease | - |
| JMW69_RS11170 () | 2341156..2341407 | + | 252 | Protein_2183 | DUF977 family protein | - |
| JMW69_RS11175 () | 2341404..2341760 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| JMW69_RS11180 () | 2342371..2342658 | + | 288 | Protein_2185 | hypothetical protein | - |
| JMW69_RS11185 () | 2343427..2344740 | + | 1314 | WP_069905218.1 | ISNCY family transposase ISCARN112 | Transposase |
| JMW69_RS11190 () | 2345190..2346398 | - | 1209 | WP_000343717.1 | IS256 family transposase IS1414 | Transposase |
| JMW69_RS11195 () | 2346497..2346829 | - | 333 | WP_069905221.1 | FlxA-like family protein | - |
| JMW69_RS11200 () | 2347032..2347337 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| JMW69_RS11205 () | 2347362..2347601 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JMW69_RS11210 () | 2347601..2347888 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JMW69_RS11215 () | 2347960..2348115 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JMW69_RS11220 () | 2348332..2348583 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| JMW69_RS11225 () | 2348650..2348928 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| JMW69_RS11230 () | 2348930..2349979 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| JMW69_RS11235 () | 2349993..2350745 | + | 753 | WP_001047135.1 | antitermination protein | - |
| JMW69_RS11240 () | 2351023..2351112 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| JMW69_RS11245 () | 2351167..2351379 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| JMW69_RS11250 () | 2351680..2351895 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| JMW69_RS11255 () | 2352649..2352864 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| JMW69_RS11260 () | 2352869..2353180 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| JMW69_RS11265 () | 2353177..2353710 | + | 534 | WP_001092971.1 | lysozyme | - |
| JMW69_RS11270 () | 2353707..2354204 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| JMW69_RS11275 () | 2354567..2354779 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JMW69_RS11280 () | 2354790..2354978 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| JMW69_RS11285 () | 2354981..2355046 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| JMW69_RS11290 () | 2355126..2355281 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| JMW69_RS11295 () | 2355453..2355626 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| JMW69_RS11300 () | 2355778..2356188 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| JMW69_RS11305 () | 2356246..2356479 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| JMW69_RS11310 () | 2356868..2357413 | + | 546 | WP_000453589.1 | DNA-packaging protein | - |
| JMW69_RS11315 () | 2357371..2357697 | + | 327 | Protein_2212 | phage tail protein | - |
| JMW69_RS11320 () | 2357664..2357972 | + | 309 | WP_071524888.1 | phage tail protein | - |
| JMW69_RS11325 () | 2357972..2358547 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| JMW69_RS11330 () | 2358670..2359878 | - | 1209 | WP_000343717.1 | IS256 family transposase IS1414 | Transposase |
| JMW69_RS11335 () | 2359967..2360557 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| JMW69_RS11340 () | 2360874..2361107 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| JMW69_RS11345 () | 2361176..2361289 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| JMW69_RS11350 () | 2361871..2362568 | - | 698 | Protein_2219 | IS1 family transposase | - |
| JMW69_RS11355 () | 2362670..2363953 | + | 1284 | Protein_2220 | MHS family MFS transporter YdfJ | - |
| JMW69_RS11360 () | 2364042..2365502 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| JMW69_RS11365 () | 2365537..2365740 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JMW69_RS11370 () | 2365917..2366603 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| JMW69_RS11375 () | 2366692..2367438 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|