MGE detailed information
MGE type: Prophage MGE length: 21873 bp
Accession: NZ_LR890508 Location: 587727..609599 Organism: Escherichia coli isolate MSB1_9I-sc-2280417 Replicon: chromosome
Accession: NZ_LR890508 Location: 587727..609599 Organism: Escherichia coli isolate MSB1_9I-sc-2280417 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW57_RS02875 () | 582978..583688 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JMW57_RS02880 () | 583691..584251 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JMW57_RS02885 () | 584286..584627 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| JMW57_RS02890 () | 584762..585088 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| JMW57_RS02895 () | 585294..586508 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| JMW57_RS02900 () | 586520..587539 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| JMW57_RS02905 () | 587597..587707 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| JMW57_RS02910 () | 587727..589007 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| JMW57_RS02915 () | 589042..589293 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| JMW57_RS02920 () | 589366..591837 | - | 2472 | WP_201524613.1 | exonuclease | - |
| JMW57_RS02925 () | 591930..592121 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| JMW57_RS02930 () | 592118..592306 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| JMW57_RS02935 () | 592411..592632 | + | 222 | WP_024172460.1 | hypothetical protein | - |
| JMW57_RS02940 () | 592613..593578 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| JMW57_RS02945 () | 593619..593807 | + | 189 | Protein_577 | DUF977 family protein | - |
| JMW57_RS02950 () | 594087..594419 | - | 333 | WP_001301033.1 | protein FlxA | - |
| JMW57_RS02955 () | 594622..594927 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| JMW57_RS02960 () | 594952..595191 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JMW57_RS02965 () | 595191..595478 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JMW57_RS02970 () | 595550..595705 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JMW57_RS02975 () | 595889..596287 | + | 399 | Protein_583 | antitermination protein | - |
| JMW57_RS02980 () | 596565..596654 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| JMW57_RS02985 () | 596709..596921 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| JMW57_RS02990 () | 597222..597437 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| JMW57_RS02995 () | 598191..598406 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| JMW57_RS03000 () | 598411..598722 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| JMW57_RS03005 () | 598719..599252 | + | 534 | WP_001556614.1 | lysozyme | - |
| JMW57_RS03010 () | 599249..599746 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| JMW57_RS03015 () | 600109..600321 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JMW57_RS03020 () | 600332..600520 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| JMW57_RS03025 () | 600523..600588 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| JMW57_RS03030 () | 600668..600823 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| JMW57_RS03035 () | 600995..601168 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| JMW57_RS03040 () | 601320..601730 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| JMW57_RS03045 () | 601788..601961 | - | 174 | WP_001301001.1 | YlcI/YnfO family protein | - |
| JMW57_RS03050 () | 601970..602362 | + | 393 | Protein_598 | DNA-packaging protein | - |
| JMW57_RS03055 () | 602337..602894 | + | 558 | Protein_599 | phage terminase large subunit family protein | - |
| JMW57_RS03060 () | 602890..603576 | + | 687 | Protein_600 | DUF1983 domain-containing protein | - |
| JMW57_RS03065 () | 603576..603929 | + | 354 | Protein_601 | hypothetical protein | - |
| JMW57_RS03070 () | 603929..604504 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| JMW57_RS03075 () | 604602..605192 | - | 591 | WP_201524548.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| JMW57_RS03080 () | 605509..605742 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| JMW57_RS03085 () | 605811..605924 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| JMW57_RS03090 () | 606529..607812 | + | 1284 | Protein_606 | MHS family MFS transporter YdfJ | - |
| JMW57_RS03095 () | 607901..609361 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| JMW57_RS03100 () | 609396..609599 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JMW57_RS03105 () | 609776..610462 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| JMW57_RS03110 () | 610551..611297 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| JMW57_RS03115 () | 611434..613479 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| JMW57_RS03120 () | 613523..614041 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|