MGE detailed information
MGE type: Conjugative plasmid MGE length: 135529 bp
Accession: NZ_LR890182 Location: 1..135529 Organism: Citrobacter freundii isolate MSB1_1H-sc-2280393 Replicon: plasmid 2
Accession: NZ_LR890182 Location: 1..135529 Organism: Citrobacter freundii isolate MSB1_1H-sc-2280393 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMV71_RS23610 () | 1..867 | + | 867 | WP_048227619.1 | hypothetical protein | - |
| JMV71_RS23615 () | 2330..2599 | - | 270 | WP_079935185.1 | hypothetical protein | - |
| JMV71_RS23620 () | 2924..3397 | - | 474 | WP_048227683.1 | thermonuclease family protein | - |
| JMV71_RS23625 () | 3394..4074 | - | 681 | WP_121572312.1 | hypothetical protein | - |
| JMV71_RS23630 () | 4071..5330 | - | 1260 | WP_121572311.1 | hypothetical protein | - |
| JMV71_RS23635 () | 5327..5581 | - | 255 | WP_079935184.1 | hypothetical protein | - |
| JMV71_RS23640 () | 5966..6640 | - | 675 | WP_079935183.1 | hypothetical protein | - |
| JMV71_RS23645 () | 6903..8036 | + | 1134 | WP_048227679.1 | DUF3800 domain-containing protein | - |
| JMV71_RS23650 () | 8110..8604 | - | 495 | WP_075552852.1 | hypothetical protein | - |
| JMV71_RS23655 () | 8913..9608 | - | 696 | WP_095533166.1 | DNA-binding protein | - |
| JMV71_RS23660 () | 9803..9991 | + | 189 | WP_121572309.1 | hypothetical protein | - |
| JMV71_RS23665 () | 10561..11679 | - | 1119 | WP_121572308.1 | NADH:flavin oxidoreductase/NADH oxidase | - |
| JMV71_RS23670 () | 11793..12413 | - | 621 | WP_121572307.1 | DUF1349 domain-containing protein | - |
| JMV71_RS23675 () | 12534..13382 | - | 849 | WP_121572352.1 | MFS transporter | - |
| JMV71_RS23680 () | 13727..14137 | - | 411 | Protein_14 | hypothetical protein | - |
| JMV71_RS23685 () | 14302..15474 | - | 1173 | WP_121572351.1 | MFS transporter | - |
| JMV71_RS23690 () | 15554..16312 | - | 759 | WP_121572306.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| JMV71_RS23695 () | 16547..17602 | + | 1056 | WP_121572305.1 | IS630 family transposase ISPlu8 | Transposase |
| JMV71_RS23700 () | 17677..20109 | + | 2433 | WP_121572304.1 | molybdopterin-dependent oxidoreductase | - |
| JMV71_RS23705 () | 20123..20749 | + | 627 | WP_121572303.1 | dimethylsulfoxide reductase subunit B | - |
| JMV71_RS23710 () | 20742..21515 | + | 774 | WP_121572302.1 | dimethyl sulfoxide reductase anchor subunit | - |
| JMV71_RS23715 () | 21552..22148 | + | 597 | WP_121572301.1 | molecular chaperone | - |
| JMV71_RS23720 () | 22145..22681 | + | 537 | WP_121572300.1 | ferredoxin-type protein NapF | - |
| JMV71_RS23725 () | 22990..23139 | - | 150 | WP_161556284.1 | IS3 family transposase ISSod2 | Transposase |
| JMV71_RS23730 () | 23406..23681 | + | 276 | WP_121572299.1 | formaldehyde-responsive transcriptional repressor FrmR | - |
| JMV71_RS23735 () | 23716..24825 | + | 1110 | WP_121572298.1 | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | - |
| JMV71_RS23740 () | 24867..25265 | + | 399 | WP_008813494.1 | VOC family protein | - |
| JMV71_RS23745 () | 25331..26167 | + | 837 | WP_047732446.1 | S-formylglutathione hydrolase | - |
| JMV71_RS23750 () | 26195..26830 | - | 636 | WP_047732266.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| JMV71_RS23755 () | 27329..28066 | + | 738 | Protein_29 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| JMV71_RS23760 () | 28170..29606 | - | 1437 | WP_121572296.1 | aldehyde dehydrogenase family protein | - |
| JMV71_RS23765 () | 30521..30682 | + | 162 | WP_047732281.1 | type I toxin-antitoxin system Hok family toxin | - |
| JMV71_RS23770 () | 30935..31192 | - | 258 | WP_077258044.1 | DUF2767 family protein | - |
| JMV71_RS23775 () | 31904..33946 | + | 2043 | WP_121572294.1 | hypothetical protein | - |
| JMV71_RS23780 () | 34204..35211 | - | 1008 | WP_201506625.1 | hypothetical protein | - |
| JMV71_RS23785 () | 35165..35731 | - | 567 | Protein_35 | transposase zinc-binding domain-containing protein | - |
| JMV71_RS23790 () | 35778..36077 | + | 300 | WP_053065086.1 | IS3 family transposase IS911 | Transposase |
| JMV71_RS23795 () | 36131..36412 | + | 282 | WP_201506619.1 | hypothetical protein | - |
| JMV71_RS23800 () | 36866..38677 | + | 1812 | WP_201506620.1 | beta-glucoside-specific PTS transporter subunit IIABC | - |
| JMV71_RS23805 () | 38677..40140 | + | 1464 | WP_047732321.1 | family 1 glycosylhydrolase | - |
| JMV71_RS23810 () | 40162..40998 | + | 837 | WP_121572293.1 | PRD domain-containing protein | - |
| JMV71_RS23815 () | 41159..41380 | + | 222 | Protein_41 | transposase | - |
| JMV71_RS23820 () | 41533..41739 | - | 207 | WP_047732331.1 | hypothetical protein | - |
| JMV71_RS23825 () | 41838..42581 | - | 744 | Protein_43 | IS21 family transposase ISAs29 | Transposase |
| JMV71_RS23830 () | 42598..44100 | - | 1503 | WP_141227221.1 | IS21 family transposase ISAs29 | Transposase |
| JMV71_RS23835 () | 44340..44529 | + | 190 | Protein_45 | hypothetical protein | - |
| JMV71_RS23840 () | 44589..45125 | + | 537 | WP_121572291.1 | hypothetical protein | - |
| JMV71_RS23845 () | 45142..45735 | - | 594 | WP_121572290.1 | hypothetical protein | - |
| JMV71_RS23850 () | 45751..46704 | - | 954 | WP_161556283.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| JMV71_RS23855 () | 47191..48414 | - | 1224 | WP_201506621.1 | MFS transporter | - |
| JMV71_RS23860 () | 48790..49548 | + | 759 | WP_047732337.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| JMV71_RS23865 () | 49582..50763 | + | 1182 | WP_121572288.1 | MFS transporter | - |
| JMV71_RS23870 () | 50845..51474 | + | 630 | WP_063136851.1 | DUF1349 domain-containing protein | - |
| JMV71_RS23875 () | 52265..53335 | + | 1071 | WP_141227224.1 | hypothetical protein | - |
| JMV71_RS23880 () | 53481..53897 | - | 417 | WP_121572286.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JMV71_RS23885 () | 53894..54124 | - | 231 | WP_121572285.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| JMV71_RS23890 () | 54398..55423 | + | 1026 | WP_121572284.1 | hypothetical protein | - |
| JMV71_RS23895 () | 55471..56409 | - | 939 | WP_121572283.1 | hypothetical protein | - |
| JMV71_RS23900 () | 56981..57292 | + | 312 | WP_121572282.1 | hypothetical protein | - |
| JMV71_RS23905 () | 57381..57743 | + | 363 | WP_121572281.1 | hypothetical protein | - |
| JMV71_RS23910 () | 57758..58114 | + | 357 | WP_121572348.1 | hypothetical protein | - |
| JMV71_RS23915 () | 58111..58890 | + | 780 | WP_201506622.1 | IS91 family transposase ISSod25 | Transposase |
| JMV71_RS23920 () | 58946..59563 | + | 618 | WP_201506623.1 | hypothetical protein | - |
| JMV71_RS23925 () | 59633..59968 | - | 336 | WP_121572346.1 | hypothetical protein | - |
| JMV71_RS23930 () | 60206..60487 | - | 282 | WP_201506624.1 | CopG family transcriptional regulator | - |
| JMV71_RS23935 () | 60487..61125 | - | 639 | WP_121572345.1 | AAA family ATPase | - |
| JMV71_RS23940 () | 61376..62347 | + | 972 | WP_121572344.1 | plasmid segregation protein parM | - |
| JMV71_RS23945 () | 62352..62741 | + | 390 | WP_121572343.1 | plasmid partitioning/stability family protein | - |
| JMV71_RS23950 () | 62745..64013 | - | 1269 | WP_121572342.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| JMV71_RS23955 () | 64013..64441 | - | 429 | WP_121572355.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JMV71_RS23960 () | 64897..65640 | + | 744 | WP_121572341.1 | hypothetical protein | - |
| JMV71_RS23965 () | 65995..66456 | + | 462 | WP_121572340.1 | hypothetical protein | - |
| JMV71_RS23970 () | 66456..66794 | + | 339 | WP_121572339.1 | hypothetical protein | - |
| JMV71_RS23975 () | 67148..67927 | + | 780 | WP_121572338.1 | hypothetical protein | - |
| JMV71_RS23980 () | 68335..68844 | + | 510 | WP_121572337.1 | antirestriction protein ArdA | - |
| JMV71_RS23985 () | 68887..69075 | + | 189 | WP_121572336.1 | hypothetical protein | - |
| JMV71_RS23990 () | 69191..69523 | + | 333 | WP_201506618.1 | hypothetical protein | - |
| JMV71_RS23995 () | 69885..70217 | + | 333 | WP_121572334.1 | DUF905 family protein | - |
| JMV71_RS24000 () | 70285..72267 | + | 1983 | WP_121572333.1 | ParB/RepB/Spo0J family partition protein | - |
| JMV71_RS24005 () | 72311..72736 | + | 426 | WP_121572332.1 | conjugation system SOS inhibitor PsiB | - |
| JMV71_RS24010 () | 72733..73464 | + | 732 | WP_121572331.1 | plasmid SOS inhibition protein A | - |
| JMV71_RS24015 () | 73461..73697 | + | 237 | WP_121572330.1 | hypothetical protein | - |
| JMV71_RS24020 () | 73936..74094 | + | 159 | WP_121572329.1 | type I toxin-antitoxin system Hok family toxin | - |
| JMV71_RS24025 () | 74999..75355 | + | 357 | WP_121572327.1 | hypothetical protein | - |
| JMV71_RS24030 () | 75398..76216 | + | 819 | WP_121572326.1 | type I restriction-modification system subunit M | - |
| JMV71_RS24035 () | 76296..76784 | + | 489 | WP_121572354.1 | antirestriction protein | - |
| JMV71_RS24040 () | 76829..77131 | + | 303 | WP_121572325.1 | DUF957 domain-containing protein | - |
| JMV71_RS24045 () | 77128..77385 | - | 258 | WP_121572324.1 | helix-turn-helix transcriptional regulator | - |
| JMV71_RS24050 () | 78151..78387 | + | 237 | WP_121572322.1 | hypothetical protein | - |
| JMV71_RS24055 () | 78447..79016 | + | 570 | WP_153071036.1 | hypothetical protein | - |
| JMV71_RS24060 () | 79424..80257 | + | 834 | WP_121572320.1 | DUF945 domain-containing protein | - |
| JMV71_RS24065 () | 80454..80705 | - | 252 | Protein_91 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| JMV71_RS24070 () | 80957..81292 | + | 336 | WP_048227655.1 | nikA protein | - |
| JMV71_RS24075 () | 81314..84013 | + | 2700 | WP_048227654.1 | hypothetical protein | Relaxase |
| JMV71_RS24080 () | 84109..85260 | + | 1152 | WP_048227653.1 | hypothetical protein | VF |
| JMV71_RS24085 () | 85386..86162 | + | 777 | WP_121572319.1 | hypothetical protein | - |
| JMV71_RS24090 () | 86193..86462 | - | 270 | WP_048227650.1 | hypothetical protein | - |
| JMV71_RS24095 () | 86535..88835 | - | 2301 | WP_053389033.1 | TraM recognition domain-containing protein | - |
| JMV71_RS24100 () | 88944..90074 | + | 1131 | WP_053389034.1 | IS200-IS605 family transposase ISEc42 | Transposase |
| JMV71_RS24105 () | 90130..91329 | - | 1200 | WP_053389035.1 | thioredoxin fold domain-containing protein | - |
| JMV71_RS24110 () | 91382..92590 | - | 1209 | WP_053389036.1 | hypothetical protein | - |
| JMV71_RS24115 () | 92893..93525 | - | 633 | WP_053069310.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JMV71_RS24120 () | 93587..95749 | - | 2163 | WP_053389037.1 | DotA/TraY family protein | - |
| JMV71_RS24125 () | 95806..96348 | - | 543 | WP_094935555.1 | conjugal transfer protein TraX | - |
| JMV71_RS24130 () | 96345..97547 | - | 1203 | WP_048227644.1 | conjugal transfer protein TraW | - |
| JMV71_RS24135 () | 97560..98132 | - | 573 | WP_161556285.1 | conjugal transfer protein TraV | - |
| JMV71_RS24140 () | 98129..101182 | - | 3054 | WP_121572317.1 | ATP-binding protein | - |
| JMV71_RS24145 () | 101341..102123 | - | 783 | Protein_107 | conjugal transfer protein TraT | - |
| JMV71_RS24150 () | 102169..102573 | - | 405 | WP_048227642.1 | hypothetical protein | - |
| JMV71_RS24155 () | 102608..103132 | - | 525 | WP_048227641.1 | conjugal transfer protein TraQ | - |
| JMV71_RS24160 () | 103132..103905 | - | 774 | WP_129719564.1 | conjugal transfer protein TraP | - |
| JMV71_RS24165 () | 103886..105202 | - | 1317 | WP_069325141.1 | conjugal transfer protein TraO | - |
| JMV71_RS24170 () | 105202..106185 | - | 984 | WP_048227638.1 | hypothetical protein | VF |
| JMV71_RS24175 () | 106196..106897 | - | 702 | WP_048227637.1 | hypothetical protein | VF |
| JMV71_RS24180 () | 106903..107241 | - | 339 | WP_095533170.1 | conjugal transfer protein | - |
| JMV71_RS24185 () | 107271..111770 | - | 4500 | WP_121572316.1 | hypothetical protein | - |
| JMV71_RS24190 () | 111842..112129 | - | 288 | WP_048227635.1 | hypothetical protein | - |
| JMV71_RS24195 () | 112126..113286 | - | 1161 | WP_048227634.1 | putative protein YggR | VF |
| JMV71_RS24200 () | 113298..114104 | - | 807 | WP_121572315.1 | hypothetical protein | VF |
| JMV71_RS24205 () | 114101..114574 | - | 474 | WP_121572314.1 | DotD/TraH family lipoprotein | - |
| JMV71_RS24210 () | 114707..115915 | - | 1209 | WP_099530103.1 | conjugal transfer protein TraF | - |
| JMV71_RS24215 () | 116018..116854 | - | 837 | WP_048227630.1 | hypothetical protein | - |
| JMV71_RS24220 () | 117000..117476 | - | 477 | WP_145996426.1 | hypothetical protein | - |
| JMV71_RS24225 () | 117496..118629 | - | 1134 | WP_095533169.1 | IS91 family transposase ISShvi3 | Transposase |
| JMV71_RS24230 () | 119497..119865 | + | 369 | WP_077223971.1 | phage tail protein | - |
| JMV71_RS24235 () | 120247..120753 | - | 507 | WP_077223963.1 | Galactoside O-acetyltransferase | VF |
| JMV71_RS24240 () | 120808..122094 | - | 1287 | WP_058687259.1 | hypothetical protein | VF |
| JMV71_RS24245 () | 122091..122765 | - | 675 | WP_121572313.1 | prepilin peptidase | - |
| JMV71_RS24250 () | 122750..123268 | - | 519 | WP_171846128.1 | hypothetical protein | VF |
| JMV71_RS24255 () | 123317..123931 | - | 615 | WP_052463753.1 | hypothetical protein | VF |
| JMV71_RS24260 () | 123945..125039 | - | 1095 | WP_040231337.1 | hypothetical protein | VF |
| JMV71_RS24265 () | 125032..126591 | - | 1560 | WP_048227627.1 | hypothetical protein | VF |
| JMV71_RS24270 () | 126594..127094 | - | 501 | WP_053069306.1 | hypothetical protein | VF |
| JMV71_RS24275 () | 127078..128382 | - | 1305 | WP_048227626.1 | hypothetical protein | VF |
| JMV71_RS24280 () | 128384..130060 | - | 1677 | WP_048227625.1 | hypothetical protein | VF |
| JMV71_RS24285 () | 130075..130512 | - | 438 | WP_121572353.1 | hypothetical protein | VF |
| JMV71_RS24290 () | 130512..131603 | - | 1092 | WP_048227686.1 | hypothetical protein | VF |
| JMV71_RS24295 () | 131659..132339 | - | 681 | WP_048227624.1 | hypothetical protein | - |
| JMV71_RS24300 () | 132579..133088 | - | 510 | WP_048227623.1 | transcription termination factor NusG | - |
| JMV71_RS24305 () | 133372..133632 | - | 261 | WP_048227622.1 | sigma-70 family RNA polymerase sigma factor | - |
| JMV71_RS24310 () | 134084..134746 | - | 663 | WP_048227621.1 | PAS domain-containing protein | - |
| JMV71_RS24315 () | 135017..135217 | + | 201 | WP_048227620.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|