MGE detailed information
MGE type: Prophage MGE length: 60884 bp
Accession: NZ_LR882050 Location: 612913..673796 Organism: Escherichia coli isolate 2016-02-324 Replicon: chromosome
Accession: NZ_LR882050 Location: 612913..673796 Organism: Escherichia coli isolate 2016-02-324 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHP20_RS02995 () | 608812..610032 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| IHP20_RS03000 () | 610157..610852 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| IHP20_RS03005 () | 610805..612097 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| IHP20_RS03010 () | 612256..612870 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| IHP20_RS03015 () | 612913..613767 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| IHP20_RS03020 () | 613769..614386 | - | 618 | WP_074502042.1 | dimethylsulfoxide reductase subunit B | - |
| IHP20_RS03025 () | 614397..616820 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| IHP20_RS03030 () | 616881..619307 | - | 2427 | Protein_594 | dimethyl sulfoxide reductase subunit A | - |
| IHP20_RS03035 () | 619506..619811 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| IHP20_RS03040 () | 619919..620629 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| IHP20_RS03045 () | 620632..621192 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| IHP20_RS03050 () | 621227..621568 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| IHP20_RS03055 () | 621704..622030 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| IHP20_RS03060 () | 622236..623450 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| IHP20_RS03065 () | 623462..624481 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| IHP20_RS03070 () | 624539..624649 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| IHP20_RS03075 () | 624669..625949 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| IHP20_RS03080 () | 625984..626235 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| IHP20_RS03085 () | 626308..628779 | - | 2472 | WP_000048342.1 | exonuclease | - |
| IHP20_RS03090 () | 628872..629063 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| IHP20_RS03095 () | 629060..629248 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| IHP20_RS03100 () | 629817..630035 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| IHP20_RS03105 () | 630195..630350 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| IHP20_RS03110 () | 630517..630924 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| IHP20_RS03115 () | 631008..631238 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| IHP20_RS03120 () | 631222..631743 | + | 522 | WP_000705358.1 | hypothetical protein | - |
| IHP20_RS03125 () | 631724..632689 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| IHP20_RS03130 () | 632730..633152 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| IHP20_RS03135 () | 633149..633505 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| IHP20_RS03140 () | 634116..634403 | + | 288 | Protein_616 | hypothetical protein | - |
| IHP20_RS03145 () | 635172..636485 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| IHP20_RS03150 () | 636922..637254 | - | 333 | WP_001301033.1 | protein FlxA | - |
| IHP20_RS03155 () | 637457..637762 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| IHP20_RS03160 () | 637787..638026 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IHP20_RS03165 () | 638026..638313 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IHP20_RS03170 () | 638385..638540 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IHP20_RS03175 () | 638757..639008 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| IHP20_RS03180 () | 639075..639353 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| IHP20_RS03185 () | 639355..640404 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| IHP20_RS03190 () | 640418..641170 | + | 753 | WP_001047135.1 | antitermination protein | - |
| IHP20_RS03195 () | 641448..641537 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| IHP20_RS03200 () | 641592..641804 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| IHP20_RS03205 () | 642105..642320 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| IHP20_RS03210 () | 643074..643289 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| IHP20_RS03215 () | 643294..643605 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| IHP20_RS03220 () | 643602..644135 | + | 534 | WP_001092971.1 | lysozyme | - |
| IHP20_RS03225 () | 644132..644629 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| IHP20_RS03230 () | 644992..645204 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| IHP20_RS03235 () | 645215..645403 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| IHP20_RS03240 () | 645406..645471 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| IHP20_RS03245 () | 645551..645706 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| IHP20_RS03250 () | 645878..646051 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| IHP20_RS03255 () | 646203..646613 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| IHP20_RS03260 () | 646671..646904 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| IHP20_RS03265 () | 647293..647838 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| IHP20_RS03270 () | 647813..649738 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| IHP20_RS03275 () | 649735..649941 | + | 207 | WP_000198149.1 | gpW family protein | - |
| IHP20_RS03280 () | 649938..651539 | + | 1602 | WP_001358597.1 | phage portal protein | - |
| IHP20_RS03285 () | 651520..652839 | + | 1320 | WP_134388747.1 | S49 family peptidase | - |
| IHP20_RS03290 () | 652849..653181 | + | 333 | WP_191528478.1 | head decoration protein | - |
| IHP20_RS03295 () | 653237..654262 | + | 1026 | WP_191528480.1 | major capsid protein | - |
| IHP20_RS03300 () | 654304..654702 | + | 399 | WP_032178303.1 | DNA-packaging protein FI | - |
| IHP20_RS03305 () | 654714..655067 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| IHP20_RS03310 () | 655079..655657 | + | 579 | WP_000975075.1 | phage tail protein | - |
| IHP20_RS03315 () | 655654..656049 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| IHP20_RS03320 () | 656057..656797 | + | 741 | WP_134388748.1 | phage tail protein | - |
| IHP20_RS03325 () | 656813..657235 | + | 423 | WP_000479164.1 | phage minor tail protein G | - |
| IHP20_RS03330 () | 657217..657651 | + | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| IHP20_RS03335 () | 657644..660205 | + | 2562 | WP_191528482.1 | phage tail tape measure protein | - |
| IHP20_RS03340 () | 660202..660531 | + | 330 | WP_000847331.1 | phage tail protein | - |
| IHP20_RS03345 () | 660531..661229 | + | 699 | WP_001152570.1 | phage minor tail protein L | - |
| IHP20_RS03350 () | 661235..661978 | + | 744 | WP_187186162.1 | C40 family peptidase | - |
| IHP20_RS03355 () | 661915..662523 | + | 609 | WP_191528483.1 | tail assembly protein | - |
| IHP20_RS03360 () | 662584..665982 | + | 3399 | WP_191528485.1 | host specificity protein J | - |
| IHP20_RS03365 () | 666049..666648 | + | 600 | WP_191528487.1 | Outer membrane protein X | VF |
| IHP20_RS03370 () | 666713..670315 | + | 3603 | WP_191528489.1 | prophage tail fiber N-terminal domain-containing protein | - |
| IHP20_RS03375 () | 670367..670489 | + | 123 | Protein_663 | tail fiber assembly protein | - |
| IHP20_RS03380 () | 670587..671177 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IHP20_RS03385 () | 671494..671727 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| IHP20_RS03390 () | 671796..671909 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| IHP20_RS03395 () | 672513..673796 | + | 1284 | Protein_667 | MHS family MFS transporter YdfJ | - |
| IHP20_RS03400 () | 673885..675345 | + | 1461 | WP_074502536.1 | mannitol dehydrogenase family protein | - |
| IHP20_RS03405 () | 675381..675584 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| IHP20_RS03410 () | 675761..676447 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| IHP20_RS03415 () | 676536..677282 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|