MGE detailed information
MGE type: Conjugative plasmid MGE length: 92214 bp
Accession: NZ_LR740760 Location: 1..92214 Organism: Escherichia coli strain BEN5202 isolate laying hen 51 weeks old Replicon: plasmid pbAPEC5202
Accession: NZ_LR740760 Location: 1..92214 Organism: Escherichia coli strain BEN5202 isolate laying hen 51 weeks old Replicon: plasmid pbAPEC5202
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APEC5202_RS26025 () | 5..576 | + | 572 | Protein_0 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| APEC5202_RS26030 () | 821..2157 | + | 1337 | Protein_1 | conjugal transfer protein TraH | - |
| APEC5202_RS26035 () | 2150..4947 | + | 2798 | Protein_2 | conjugal transfer mating pair stabilization protein TraG | - |
| APEC5202_RS26040 () | 4966..5459 | + | 494 | Protein_3 | entry exclusion protein | - |
| APEC5202_RS26045 () | 5392..5685 | + | 294 | WP_162542034.1 | hypothetical protein | - |
| APEC5202_RS26050 () | 5682..6221 | + | 540 | WP_123003876.1 | complement resistance protein TraT | - |
| APEC5202_RS26055 () | 6424..6657 | + | 234 | Protein_6 | hypothetical protein | - |
| APEC5202_RS26060 () | 6742..7166 | + | 425 | Protein_7 | IS66 family transposase ISEc23 | Transposase |
| APEC5202_RS26065 () | 7163..7514 | + | 352 | Protein_8 | IS66 family transposase ISEc23 | Transposase |
| APEC5202_RS26070 () | 7546..9157 | + | 1612 | Protein_9 | IS66 family transposase ISEc43 | Transposase |
| APEC5202_RS26075 () | 9200..9700 | + | 501 | WP_174235640.1 | hypothetical protein | - |
| APEC5202_RS26080 () | 9751..12003 | + | 2253 | WP_161477595.1 | type IV conjugative transfer system coupling protein TraD | - |
| APEC5202_RS26085 () | 12003..17276 | + | 5274 | Protein_12 | Multifunctional conjugation protein TraI | Relaxase |
| APEC5202_RS26090 () | 17296..18042 | + | 747 | WP_021534916.1 | conjugal transfer pilus acetylase TraX | - |
| APEC5202_RS26095 () | 18097..18657 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| APEC5202_RS26100 () | 18788..19000 | + | 213 | WP_032161968.1 | hypothetical protein | - |
| APEC5202_RS26105 () | 19245..19706 | + | 462 | WP_001233850.1 | thermonuclease family protein | - |
| APEC5202_RS26110 () | 19752..19961 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| APEC5202_RS26115 () | 19999..20589 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| APEC5202_RS26120 () | 20744..21193 | + | 450 | WP_053287837.1 | hypothetical protein | - |
| - () | 21360..21416 | - | 57 | NuclAT_1 | - | - |
| - () | 21360..21416 | - | 57 | NuclAT_1 | - | - |
| - () | 21360..21416 | - | 57 | NuclAT_1 | - | - |
| - () | 21360..21416 | - | 57 | NuclAT_1 | - | - |
| APEC5202_RS26125 () | 21408..21614 | + | 207 | WP_000876345.1 | type I toxin-antitoxin system Hok family toxin | - |
| APEC5202_RS26130 () | 21898..22158 | + | 261 | WP_021536205.1 | replication regulatory protein RepA | - |
| APEC5202_RS26135 () | 22394..22468 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| APEC5202_RS26140 () | 22461..23318 | + | 858 | WP_141088306.1 | incFII family plasmid replication initiator RepA | - |
| APEC5202_RS26145 () | 24285..24596 | + | 312 | WP_029364446.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| APEC5202_RS26150 () | 24596..24883 | + | 288 | WP_000865085.1 | helix-turn-helix transcriptional regulator | - |
| APEC5202_RS26155 () | 24939..25691 | - | 753 | Protein_26 | IS110 family transposase | - |
| APEC5202_RS26645 () | 25666..25872 | + | 207 | WP_024187766.1 | hypothetical protein | - |
| APEC5202_RS26160 () | 25856..25963 | + | 108 | Protein_28 | helix-turn-helix domain-containing protein | - |
| APEC5202_RS26165 () | 26223..27086 | - | 864 | WP_021534910.1 | endonuclease/exonuclease/phosphatase family protein | - |
| APEC5202_RS26170 () | 27179..28715 | - | 1537 | Protein_30 | IS66 family transposase ISEc22 | Transposase |
| APEC5202_RS26175 () | 28765..29112 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| APEC5202_RS26180 () | 29109..29498 | - | 390 | WP_139120226.1 | IS66 family transposase ISEc8 | Transposase |
| APEC5202_RS26185 () | 30186..30749 | - | 564 | WP_021534908.1 | pentapeptide repeat-containing protein | - |
| APEC5202_RS26190 () | 30753..31484 | - | 732 | WP_021534907.1 | ATP-binding cassette domain-containing protein | - |
| APEC5202_RS26195 () | 31481..32206 | - | 726 | WP_000258040.1 | microcin B17 immunity protein McbE | - |
| APEC5202_RS26200 () | 32216..33406 | - | 1191 | WP_103530048.1 | YcaO-like family protein | - |
| APEC5202_RS26205 () | 33387..34205 | - | 819 | WP_001528601.1 | SagB/ThcOx family dehydrogenase | - |
| APEC5202_RS26210 () | 34207..35094 | - | 888 | WP_032289640.1 | McbB family protein | - |
| APEC5202_RS26215 () | 35121..35333 | - | 213 | WP_021534904.1 | microcin B17 | - |
| APEC5202_RS26220 () | 35788..36441 | + | 654 | WP_025492075.1 | CPBP family intramembrane metalloprotease | - |
| APEC5202_RS26225 () | 36534..36791 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| APEC5202_RS26230 () | 36724..37125 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| APEC5202_RS26235 () | 37128..37289 | + | 162 | WP_025492076.1 | Rop family plasmid primer RNA-binding protein | - |
| APEC5202_RS26240 () | 37715..38515 | + | 801 | WP_025492077.1 | DUF1868 domain-containing protein | - |
| APEC5202_RS26245 () | 39164..39445 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| APEC5202_RS26250 () | 39568..39918 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| APEC5202_RS26255 () | 39921..40883 | - | 963 | WP_025492132.1 | plasmid segregation protein ParM | - |
| APEC5202_RS26260 () | 41031..41324 | + | 294 | WP_032307475.1 | hypothetical protein | - |
| APEC5202_RS26265 () | 41419..42321 | + | 903 | WP_096002845.1 | DUF1281 domain-containing protein | - |
| APEC5202_RS26275 () | 42850..43152 | + | 303 | WP_001364029.1 | antirestriction protein | - |
| APEC5202_RS26280 () | 43199..43621 | + | 423 | WP_021534897.1 | DUF1380 family protein | - |
| APEC5202_RS26285 () | 43618..43809 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| APEC5202_RS26290 () | 44081..44329 | - | 249 | WP_001403191.1 | hypothetical protein | - |
| APEC5202_RS26295 () | 44847..45077 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| APEC5202_RS26300 () | 45129..46490 | + | 1362 | WP_103530027.1 | DUF3560 domain-containing protein | - |
| APEC5202_RS26305 () | 46537..47100 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| APEC5202_RS26650 () | 47252..47635 | + | 384 | WP_162542035.1 | hypothetical protein | - |
| APEC5202_RS26310 () | 48012..48464 | + | 453 | WP_103530050.1 | single-stranded DNA-binding protein | - |
| APEC5202_RS26315 () | 48526..48759 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| APEC5202_RS26320 () | 48818..50776 | + | 1959 | WP_141088311.1 | ParB/RepB/Spo0J family partition protein | - |
| APEC5202_RS26325 () | 50831..51265 | + | 435 | WP_123004679.1 | conjugation system SOS inhibitor PsiB | - |
| APEC5202_RS26330 () | 51262..51981 | + | 720 | WP_029490503.1 | plasmid SOS inhibition protein A | - |
| - () | 51993..52187 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51993..52187 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51993..52187 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51993..52187 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| APEC5202_RS26335 () | 52252..52410 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| APEC5202_RS26345 () | 53334..53621 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| APEC5202_RS26350 () | 53740..54561 | + | 822 | WP_029490175.1 | DUF945 domain-containing protein | - |
| APEC5202_RS26355 () | 54857..55504 | - | 648 | WP_141088316.1 | hypothetical protein | VF |
| APEC5202_RS26360 () | 55790..56173 | + | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| APEC5202_RS26365 () | 56367..57059 | + | 693 | WP_103530060.1 | PAS domain-containing protein | - |
| APEC5202_RS26370 () | 57164..57391 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| APEC5202_RS26375 () | 57425..57784 | + | 360 | WP_021534888.1 | type IV conjugative transfer system pilin TraA | - |
| APEC5202_RS26380 () | 57799..58110 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| APEC5202_RS26385 () | 58132..58698 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| APEC5202_RS26390 () | 58709..59413 | + | 705 | WP_148723212.1 | type-F conjugative transfer system secretin TraK | - |
| APEC5202_RS26395 () | 59413..60840 | + | 1428 | WP_029490177.1 | conjugal transfer protein TraB | - |
| APEC5202_RS26400 () | 60830..61414 | + | 585 | WP_021536217.1 | conjugal transfer protein TraP | - |
| APEC5202_RS26405 () | 61353..61721 | + | 369 | WP_021536216.1 | conjugal transfer protein TrbD | - |
| APEC5202_RS26410 () | 61714..61965 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| APEC5202_RS26415 () | 61962..62477 | + | 516 | WP_000809891.1 | type IV conjugative transfer system lipoprotein TraV | - |
| APEC5202_RS26420 () | 62612..62833 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| APEC5202_RS26425 () | 62826..63299 | + | 474 | WP_103530056.1 | hypothetical protein | - |
| APEC5202_RS26430 () | 63379..63593 | + | 215 | Protein_81 | hypothetical protein | - |
| APEC5202_RS26435 () | 63621..63983 | + | 363 | WP_021534936.1 | hypothetical protein | - |
| APEC5202_RS26440 () | 64109..66739 | + | 2631 | WP_161477596.1 | type IV secretion system protein TraC | - |
| APEC5202_RS26445 () | 66736..67122 | + | 387 | WP_029400173.1 | type-F conjugative transfer system protein TrbI | - |
| APEC5202_RS26450 () | 67119..67751 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| APEC5202_RS26455 () | 67748..68740 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| APEC5202_RS26655 () | 68761..68940 | + | 180 | WP_032193743.1 | hypothetical protein | - |
| APEC5202_RS26460 () | 69369..70007 | + | 639 | WP_021514850.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| APEC5202_RS26465 () | 70004..70375 | + | 372 | WP_021514849.1 | hypothetical protein | - |
| APEC5202_RS26470 () | 70400..70822 | + | 423 | WP_001229306.1 | HNH endonuclease | - |
| APEC5202_RS26475 () | 70819..72669 | + | 1851 | WP_021537336.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| APEC5202_RS26480 () | 72696..72953 | + | 258 | WP_021536241.1 | conjugal transfer protein TrbE | - |
| APEC5202_RS26485 () | 72946..73689 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| APEC5202_RS26490 () | 73805..74086 | + | 282 | WP_000549795.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| APEC5202_RS26495 () | 74073..74618 | + | 546 | WP_029490179.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| APEC5202_RS26500 () | 74548..74910 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| APEC5202_RS26505 () | 74910..76283 | + | 1374 | WP_021536211.1 | conjugal transfer protein TraH | - |
| APEC5202_RS26510 () | 76280..79099 | + | 2820 | Protein_98 | conjugal transfer mating pair stabilization protein TraG | - |
| APEC5202_RS26515 () | 79118..79615 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| APEC5202_RS26520 () | 79647..80378 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| APEC5202_RS26525 () | 80579..80812 | + | 234 | Protein_101 | hypothetical protein | - |
| APEC5202_RS26530 () | 80897..81322 | + | 426 | WP_029490232.1 | IS66 family transposase ISEc23 | Transposase |
| APEC5202_RS26535 () | 81319..81669 | + | 351 | WP_000624723.1 | IS66 family transposase ISEc47 | Transposase |
| APEC5202_RS26540 () | 81700..83312 | + | 1613 | Protein_104 | IS66 family transposase | - |
| APEC5202_RS26825 () | 83497..83847 | + | 351 | Protein_105 | hypothetical protein | - |
| APEC5202_RS26830 () | 83898..86146 | + | 2249 | Protein_106 | type IV conjugative transfer system coupling protein TraD | - |
| APEC5202_RS26835 () | 86146..91402 | + | 5257 | Protein_107 | conjugative transfer relaxase/helicase TraI | - |
| APEC5202_RS26590 () | 91402..92139 | + | 738 | Protein_108 | conjugal transfer pilus acetylase TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|