MGE detailed information
MGE type: Prophage MGE length: 22461 bp
Accession: NZ_LR134136 Location: 1866073..1888533 Organism: Atlantibacter hermannii strain NCTC12129 Replicon: chromosome
Accession: NZ_LR134136 Location: 1866073..1888533 Organism: Atlantibacter hermannii strain NCTC12129 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL032_RS08575 (NCTC12129_01976) | 1861740..1862183 | + | 444 | WP_002462917.1 | dihydroneopterin triphosphate diphosphatase | - |
| EL032_RS08580 (NCTC12129_01977) | 1862211..1862951 | + | 741 | WP_002462916.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| EL032_RS08585 (NCTC12129_01978) | 1862989..1863510 | + | 522 | WP_002462915.1 | crossover junction endodeoxyribonuclease RuvC | - |
| EL032_RS08590 (NCTC12129_01979) | 1863622..1864239 | + | 618 | WP_126465866.1 | Holliday junction branch migration protein RuvA | - |
| EL032_RS08595 (NCTC12129_01981) | 1864243..1865253 | + | 1011 | Protein_1692 | Holliday junction branch migration DNA helicase RuvB | - |
| EL032_RS08600 (NCTC12129_01982) | 1865291..1866076 | - | 786 | WP_002462912.1 | zinc ABC transporter permease subunit ZnuB | - |
| EL032_RS08605 (NCTC12129_01983) | 1866073..1866828 | - | 756 | WP_002462911.1 | Zinc import ATP-binding protein ZnuC | VF |
| EL032_RS08610 | 1866907..1867850 | + | 944 | Protein_1695 | zinc ABC transporter substrate-binding protein ZnuA | - |
| EL032_RS08615 | 1867866..1869189 | + | 1324 | Protein_1696 | Murein DD-endopeptidase MepM | VF |
| EL032_RS08620 (NCTC12129_01988) | 1869314..1870288 | + | 975 | WP_002462907.1 | Lipid A biosynthesis myristoyltransferase | VF |
| EL032_RS08625 (NCTC12129_01989) | 1870324..1871766 | - | 1443 | WP_002462906.1 | pyruvate kinase | - |
| EL032_RS08630 (NCTC12129_01990) | 1871897..1872763 | - | 867 | WP_002462905.1 | MurR/RpiR family transcriptional regulator | - |
| EL032_RS08635 (NCTC12129_01991) | 1873140..1874615 | + | 1476 | WP_002462904.1 | glucose-6-phosphate dehydrogenase | - |
| EL032_RS08640 (NCTC12129_01992) | 1874841..1876652 | + | 1812 | WP_002462903.1 | phosphogluconate dehydratase | - |
| EL032_RS08645 (NCTC12129_01993) | 1876703..1877344 | + | 642 | WP_002462902.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| EL032_RS08650 (NCTC12129_01994) | 1877391..1878569 | - | 1179 | WP_002462901.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| EL032_RS08655 (NCTC12129_01995) | 1878701..1879009 | + | 309 | WP_002462899.1 | YebG family protein | - |
| EL032_RS08660 (NCTC12129_01996) | 1879115..1879456 | + | 342 | WP_002462898.1 | protein YebF | - |
| EL032_RS08665 (NCTC12129_01997) | 1879571..1880227 | + | 657 | WP_040459492.1 | tellurite resistance TerB family protein | - |
| EL032_RS08670 (NCTC12129_01998) | 1880310..1882370 | + | 2061 | WP_002462892.1 | oligopeptidase B | - |
| EL032_RS08675 (NCTC12129_01999) | 1882367..1883035 | - | 669 | WP_002462890.1 | exodeoxyribonuclease X | - |
| EL032_RS08680 (NCTC12129_02000) | 1883081..1883311 | - | 231 | WP_002462888.1 | DNA polymerase III subunit theta | - |
| EL032_RS08685 (NCTC12129_02001) | 1883462..1883836 | + | 375 | WP_040459491.1 | CopC domain-containing protein YobA | - |
| EL032_RS08690 (NCTC12129_02002) | 1883838..1884713 | + | 876 | WP_002462885.1 | copper homeostasis membrane protein CopD | - |
| EL032_RS08695 (NCTC12129_02003) | 1884738..1885076 | + | 339 | WP_040459559.1 | YebY family protein | - |
| - | 1885167..1885338 | - | 172 | - | - | Antitoxin Detail |
| - | 1885227..1885331 | + | 105 | - | - | Toxin Detail |
| EL032_RS08700 (NCTC12129_02008) | 1885844..1886489 | + | 646 | Protein_1713 | metallophosphoesterase | - |
| EL032_RS08705 | 1886490..1886683 | - | 194 | Protein_1714 | YebW family protein | - |
| EL032_RS08710 (NCTC12129_02009) | 1886790..1887029 | - | 240 | WP_002462877.1 | YebV family protein | - |
| EL032_RS08715 (NCTC12129_02010) | 1887144..1888581 | - | 1438 | Protein_1716 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| EL032_RS08720 (NCTC12129_02011) | 1888660..1891293 | - | 2634 | WP_002462873.1 | PqiB family protein | - |
| EL032_RS08725 (NCTC12129_02012) | 1891262..1892545 | - | 1284 | WP_002462871.1 | membrane integrity lipid transport subunit YebS | - |
| EL032_RS08730 (NCTC12129_02013) | 1892673..1893209 | + | 537 | WP_126465868.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|