MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 65262 bp
Accession: NZ_LR130555 Location: 861666..926927 Organism: Escherichia coli strain MS14385 isolate MS14385 Replicon: chromosome
Accession: NZ_LR130555 Location: 861666..926927 Organism: Escherichia coli strain MS14385 isolate MS14385 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EW040_RS04130 () | 858267..859415 | - | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| EW040_RS04135 () | 859487..860470 | - | 984 | WP_001361242.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| EW040_RS04140 () | 861281..861451 | - | 171 | Protein_806 | IS110 family transposase | - |
| EW040_RS04145 () | 861793..862635 | - | 843 | Protein_807 | DUF4942 domain-containing protein | - |
| EW040_RS04150 () | 862720..862914 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| EW040_RS04155 () | 862993..863142 | - | 150 | Protein_809 | hypothetical protein | - |
| EW040_RS04160 () | 863139..863516 | - | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| EW040_RS04165 () | 863606..863974 | - | 369 | WP_038432125.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EW040_RS04170 () | 864137..864358 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| EW040_RS04175 () | 864423..864899 | - | 477 | WP_021553055.1 | RadC family protein | - |
| EW040_RS04180 () | 864915..865394 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| EW040_RS04185 () | 865660..866478 | - | 819 | WP_001175165.1 | DUF945 domain-containing protein | - |
| EW040_RS04190 () | 866568..866801 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| EW040_RS04195 () | 866807..867484 | - | 678 | WP_001564058.1 | hypothetical protein | - |
| EW040_RS04200 () | 867635..868315 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| EW040_RS04205 () | 868518..869402 | - | 885 | WP_001564055.1 | 50S ribosome-binding GTPase | - |
| EW040_RS04215 () | 869503..870726 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| EW040_RS04220 () | 871889..872419 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| EW040_RS04230 () | 873089..873820 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| EW040_RS04240 () | 874341..874793 | + | 453 | WP_000558152.1 | N-acetyltransferase | - |
| EW040_RS04245 () | 875329..876264 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| EW040_RS04250 () | 876257..877192 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| EW040_RS04255 () | 877276..878526 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| EW040_RS04260 () | 878545..879639 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| EW040_RS04265 () | 880940..881506 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| EW040_RS04270 () | 881764..882339 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| EW040_RS04275 () | 882408..882641 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| EW040_RS04280 () | 882653..882878 | + | 226 | Protein_831 | hypothetical protein | - |
| EW040_RS04285 () | 882940..883206 | - | 267 | Protein_832 | IS3 family transposase IS2 | Transposase |
| EW040_RS04290 () | 883297..884454 | + | 1158 | Protein_833 | Uric acid transporter UacT | VF |
| EW040_RS04295 () | 884575..885225 | + | 651 | WP_001564048.1 | TetR/AcrR family transcriptional regulator | - |
| EW040_RS04300 () | 885248..885541 | + | 294 | Protein_835 | helix-turn-helix domain-containing protein | - |
| EW040_RS04305 () | 885898..886443 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| EW040_RS04310 () | 886488..887639 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| EW040_RS04315 () | 887768..888823 | - | 1056 | WP_001564046.1 | Nicotinate dehydrogenase FAD-subunit | VF |
| EW040_RS04320 () | 888840..890102 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| EW040_RS04330 () | 890685..891278 | - | 594 | Protein_840 | maturase | - |
| EW040_RS04335 () | 891278..891647 | - | 370 | Protein_841 | reverse transcriptase/maturase | - |
| EW040_RS04345 () | 892259..893164 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| EW040_RS04350 () | 893301..894218 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| EW040_RS04355 () | 894327..896879 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| EW040_RS04360 () | 896928..897503 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| EW040_RS04365 () | 897514..897813 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| EW040_RS04370 () | 897837..899354 | - | 1518 | WP_000997839.1 | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase | VF |
| EW040_RS04375 () | 899415..900200 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| EW040_RS04380 () | 900222..900503 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| EW040_RS04385 () | 900788..901984 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| EW040_RS04390 () | 902013..902510 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| EW040_RS04395 () | 902538..902807 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| EW040_RS04400 () | 902819..903544 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| EW040_RS04405 () | 903528..904286 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| EW040_RS04410 () | 904341..905027 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| EW040_RS04415 () | 905167..906285 | - | 1119 | WP_000135343.1 | Protein tas | VF |
| EW040_RS04420 () | 906642..907142 | + | 501 | Protein_857 | DNA-binding protein | - |
| EW040_RS04425 () | 907238..907471 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| EW040_RS04430 () | 907524..907715 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| EW040_RS04440 () | 908436..908696 | + | 261 | Protein_860 | IS3 family transposase ISLad1 | Transposase |
| EW040_RS04445 () | 908839..910584 | + | 1746 | WP_001564039.1 | AAA family ATPase | - |
| EW040_RS04450 () | 910978..911157 | + | 180 | Protein_862 | RNA pyrophosphohydrolase | VF |
| EW040_RS04455 () | 911154..911567 | + | 414 | Protein_863 | group II intron reverse transcriptase/maturase | - |
| EW040_RS04460 () | 911657..912130 | + | 474 | Protein_864 | IS3 family transposase IS629 | Transposase |
| EW040_RS04465 () | 912328..912585 | - | 258 | Protein_865 | IS3 family transposase IS911 | Transposase |
| EW040_RS04470 () | 912655..913002 | - | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| EW040_RS04480 () | 913620..914313 | - | 694 | Protein_867 | IS1 family transposase | - |
| EW040_RS04485 () | 914566..916035 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| EW040_RS04490 () | 916140..918509 | + | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| EW040_RS04495 () | 918584..920083 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| EW040_RS04500 () | 920226..920923 | + | 698 | Protein_871 | IS1 family transposase IS1S | Transposase |
| EW040_RS04510 () | 921390..921941 | - | 552 | WP_001447126.1 | RecBCD enzyme subunit RecB | VF |
| EW040_RS04520 () | 922108..922899 | - | 792 | Protein_873 | IS3 family transposase | - |
| EW040_RS04525 () | 922916..923613 | - | 698 | Protein_874 | IS1 family transposase IS1R | Transposase |
| EW040_RS04535 () | 924143..925186 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| EW040_RS04540 () | 925442..926707 | - | 1266 | WP_001218869.1 | Membrane-bound lytic murein transglycosylase A ; Integrase | Integrase |
| EW040_RS04550 () | 927086..927793 | - | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| EW040_RS27760 () | 927946..928023 | + | 78 | WP_212734103.1 | hypothetical protein | - |
| EW040_RS04555 () | 928186..930321 | + | 2136 | WP_022646105.1 | ornithine decarboxylase | - |
| EW040_RS04560 () | 930370..931626 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|