MGE detailed information
MGE type: Genomic_island MGE length: 78827 bp
Accession: NZ_CP127255 Location: 4869444..4948270 Organism: Escherichia coli strain Q5 Replicon: chromosome
Accession: NZ_CP127255 Location: 4869444..4948270 Organism: Escherichia coli strain Q5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQ972_RS23610 (4864815) | 4864815..4865999 | + | 1185 | WP_029402617.1 | tyrosine-type recombinase/integrase | - |
| QQ972_RS23615 (4866149) | 4866149..4867159 | + | 1011 | WP_000053333.1 | substrate-binding domain-containing protein | - |
| QQ972_RS23620 (4867255) | 4867255..4869381 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| QQ972_RS23625 (4869444) | 4869444..4870721 | + | 1278 | WP_097471932.1 | MFS transporter | - |
| QQ972_RS23630 (4870721) | 4870721..4872151 | + | 1431 | WP_000813679.1 | glycoside hydrolase family 32 protein | - |
| QQ972_RS23635 (4872346) | 4872346..4873740 | + | 1395 | WP_285984907.1 | carbohydrate porin | - |
| QQ972_RS23640 (4873814) | 4873814..4873990 | + | 177 | WP_162843692.1 | hypothetical protein | - |
| QQ972_RS23645 (4874190) | 4874190..4874981 | - | 792 | WP_029402616.1 | BRO family protein | - |
| QQ972_RS23650 (4875307) | 4875307..4876520 | + | 1214 | WP_162858271.1 | IS3 family transposase IS629 | Transposase |
| QQ972_RS23655 (4876565) | 4876565..4878085 | + | 1521 | Protein_4617 | AAA domain-containing protein | - |
| QQ972_RS23660 (4878194) | 4878194..4879693 | - | 1500 | WP_029402511.1 | phosphoethanolamine transferase | - |
| QQ972_RS23665 (4879878) | 4879878..4880624 | - | 747 | WP_021533152.1 | outer membrane beta-barrel protein | - |
| QQ972_RS23670 (4880842) | 4880842..4881210 | - | 369 | WP_001275820.1 | hypothetical protein | - |
| QQ972_RS23675 (4881493) | 4881493..4881671 | + | 179 | Protein_4621 | integrase | - |
| QQ972_RS23680 (4881894) | 4881894..4882790 | - | 897 | WP_000499116.1 | hypothetical protein | - |
| QQ972_RS23685 (4882790) | 4882790..4884412 | - | 1623 | WP_285984908.1 | AAA family ATPase | - |
| QQ972_RS23690 (4884421) | 4884421..4885578 | - | 1158 | WP_000118785.1 | restriction endonuclease subunit S | - |
| QQ972_RS23695 (4885575) | 4885575..4887209 | - | 1635 | WP_000627727.1 | class I SAM-dependent DNA methyltransferase | - |
| QQ972_RS23700 (4887273) | 4887273..4890686 | - | 3414 | WP_000438167.1 | DEAD/DEAH box helicase family protein | - |
| QQ972_RS23705 (4891294) | 4891294..4891808 | + | 515 | Protein_4627 | ISL3 family transposase ISEc38 | Transposase |
| QQ972_RS23710 (4892111) | 4892111..4892374 | - | 264 | WP_000676590.1 | MazG-like family protein | - |
| QQ972_RS23715 (4892841) | 4892841..4893923 | + | 1083 | WP_000637420.1 | XRE family transcriptional regulator | - |
| QQ972_RS23720 (4893926) | 4893926..4894870 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| QQ972_RS23725 (4894867) | 4894867..4895847 | - | 981 | WP_033873469.1 | thymidylate synthase | - |
| QQ972_RS23730 (4896015) | 4896015..4897176 | + | 1162 | Protein_4632 | IS3 family transposase ISEc17 | Transposase |
| QQ972_RS23735 (4897780) | 4897780..4898034 | - | 255 | Protein_4633 | VENN motif pre-toxin domain-containing protein | - |
| QQ972_RS23740 (4898876) | 4898876..4900096 | + | 1221 | WP_000410951.1 | arginine deiminase | - |
| QQ972_RS23745 (4900107) | 4900107..4901018 | + | 912 | WP_001564269.1 | carbamate kinase | - |
| QQ972_RS23750 (4901103) | 4901103..4902107 | + | 1005 | WP_000154545.1 | Ornithine carbamoyltransferase | VF |
| QQ972_RS23755 (4902155) | 4902155..4903558 | + | 1404 | WP_000514417.1 | YfcC family protein | - |
| QQ972_RS23760 (4903639) | 4903639..4904118 | + | 480 | WP_024191448.1 | ArgR family transcriptional regulator | - |
| QQ972_RS23765 (4904192) | 4904192..4904353 | + | 162 | WP_088459633.1 | pyrBI operon leader peptide | - |
| QQ972_RS23770 (4904356) | 4904356..4904613 | + | 258 | WP_029402540.1 | hypothetical protein | - |
| QQ972_RS23775 (4904765) | 4904765..4905124 | - | 360 | WP_029402539.1 | hypothetical protein | VF |
| QQ972_RS23780 (4905137) | 4905137..4906903 | - | 1767 | WP_029402537.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| QQ972_RS23785 (4907267) | 4907267..4907500 | - | 234 | WP_029402536.1 | hypothetical protein | - |
| QQ972_RS23790 (4907597) | 4907597..4908220 | - | 624 | WP_029402534.1 | hypothetical protein | - |
| QQ972_RS23795 (4908309) | 4908309..4908821 | - | 513 | WP_032288833.1 | hypothetical protein | - |
| QQ972_RS23800 (4909101) | 4909101..4909337 | - | 237 | WP_029402533.1 | AlpA family transcriptional regulator | - |
| QQ972_RS23805 (4909406) | 4909406..4909978 | - | 573 | WP_029402532.1 | hypothetical protein | - |
| QQ972_RS23810 (4910238) | 4910238..4910804 | - | 567 | WP_029402530.1 | inovirus-type Gp2 protein | - |
| QQ972_RS23815 (4912431) | 4912431..4914035 | - | 1605 | WP_097513135.1 | YfjI family protein | - |
| QQ972_RS23820 (4914468) | 4914468..4914674 | + | 207 | WP_029402620.1 | IS110 family transposase ISSm3 | Transposase |
| QQ972_RS23825 (4914676) | 4914676..4914786 | + | 111 | Protein_4651 | IS110 family transposase | - |
| QQ972_RS23830 (4914966) | 4914966..4915121 | + | 156 | WP_157921230.1 | hypothetical protein | - |
| QQ972_RS23835 (4915215) | 4915215..4915945 | - | 731 | Protein_4653 | inovirus Gp2 family protein | - |
| QQ972_RS23840 (4916616) | 4916616..4917146 | + | 531 | WP_001413264.1 | hypothetical protein | - |
| QQ972_RS23845 (4918359) | 4918359..4919489 | - | 1131 | WP_029402618.1 | hypothetical protein | - |
| QQ972_RS23850 (4919674) | 4919674..4920558 | + | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| QQ972_RS23855 (4920761) | 4920761..4921441 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QQ972_RS23860 (4921589) | 4921589..4922266 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QQ972_RS23865 (4922272) | 4922272..4922505 | + | 234 | WP_032288847.1 | DUF905 family protein | - |
| QQ972_RS23870 (4922595) | 4922595..4923413 | + | 819 | WP_024214765.1 | DUF932 domain-containing protein | - |
| QQ972_RS23875 (4923505) | 4923505..4923990 | + | 486 | WP_071045790.1 | antirestriction protein | - |
| QQ972_RS23880 (4924006) | 4924006..4924482 | + | 477 | WP_122996610.1 | RadC family protein | - |
| QQ972_RS23885 (4924545) | 4924545..4924766 | + | 222 | WP_000692326.1 | DUF987 domain-containing protein | - |
| QQ972_RS23890 (4924785) | 4924785..4925429 | + | 645 | WP_285984909.1 | antitoxin of toxin-antitoxin stability system | - |
| QQ972_RS23895 (4925479) | 4925479..4925847 | + | 369 | WP_032178229.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QQ972_RS23900 (4925937) | 4925937..4926314 | + | 378 | WP_029402447.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| QQ972_RS23905 (4926311) | 4926311..4926460 | + | 150 | Protein_4667 | DUF5983 family protein | - |
| QQ972_RS23910 (4926536) | 4926536..4926733 | + | 198 | WP_097471913.1 | DUF957 domain-containing protein | - |
| QQ972_RS23915 (4926818) | 4926818..4927684 | + | 867 | WP_024257423.1 | DUF4942 domain-containing protein | - |
| QQ972_RS23920 (4927756) | 4927756..4928019 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| QQ972_RS23925 (4928016) | 4928016..4928342 | + | 327 | WP_000779482.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QQ972_RS23930 (4928806) | 4928806..4930071 | + | 1266 | WP_097751982.1 | Prophage integrase IntS ; Integrase | Integrase |
| QQ972_RS23935 (4930653) | 4930653..4930889 | + | 237 | Protein_4673 | IS110 family transposase | - |
| QQ972_RS23940 (4931228) | 4931228..4931419 | + | 192 | Protein_4674 | ISL3 family transposase | - |
| QQ972_RS23945 (4931451) | 4931451..4931624 | + | 174 | Protein_4675 | IS3 family transposase | - |
| QQ972_RS23950 (4931689) | 4931689..4932471 | - | 783 | WP_021560923.1 | EAL domain-containing protein | - |
| QQ972_RS23955 (4932524) | 4932524..4933516 | - | 993 | WP_000878341.1 | hypothetical protein | - |
| QQ972_RS23960 (4933706) | 4933706..4934053 | - | 348 | WP_240755130.1 | Minor fimbrial protein PrsF | VF |
| QQ972_RS23965 (4934137) | 4934137..4934700 | - | 564 | WP_001077890.1 | hypothetical protein | VF |
| QQ972_RS23970 (4934737) | 4934737..4935468 | - | 732 | WP_001171048.1 | Chaperone protein PapD | VF |
| QQ972_RS23975 (4935537) | 4935537..4938046 | - | 2510 | Protein_4681 | Outer membrane usher protein PapC | VF |
| QQ972_RS23980 (4938167) | 4938167..4938754 | - | 588 | WP_021560926.1 | PAP fimbrial minor pilin protein | VF |
| QQ972_RS23985 (4938841) | 4938841..4939353 | - | 513 | WP_021560927.1 | Pap fimbrial major pilin protein | VF |
| QQ972_RS23990 (4939398) | 4939398..4939673 | - | 276 | WP_042044898.1 | adhesin biosynthesis transcription regulatory family protein | - |
| QQ972_RS23995 (4940112) | 4940112..4940967 | - | 856 | Protein_4685 | IS21 family transposase ISEc10 | Transposase |
| QQ972_RS24000 (4941286) | 4941286..4942532 | - | 1247 | Protein_4686 | two-component system response regulator PgtA | - |
| QQ972_RS24005 (4942522) | 4942522..4944531 | - | 2010 | WP_097752280.1 | two-component system sensor histidine kinase PgtB | - |
| QQ972_RS24010 (4944528) | 4944528..4945745 | - | 1218 | WP_105467724.1 | phosphoglycerate transport regulator PgtC | - |
| QQ972_RS24015 (4946144) | 4946144..4947508 | + | 1365 | WP_033546150.1 | Phosphoglycerate transporter protein | VF |
| QQ972_RS24020 (4947551) | 4947551..4947916 | + | 366 | WP_000639466.1 | hypothetical protein | - |
| QQ972_RS24025 (4948004) | 4948004..4948267 | + | 264 | Protein_4691 | IS3 family transposase ISEc48 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|