MGE detailed information
MGE type: Prophage MGE length: 55107 bp
Accession: NZ_CP126325 Location: 2042760..2097866 Organism: Salmonella enterica subsp. enterica strain HL21 Replicon: chromosome
Accession: NZ_CP126325 Location: 2042760..2097866 Organism: Salmonella enterica subsp. enterica strain HL21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN088_RS09830 () | 2038498..2038950 | + | 453 | WP_000653695.1 | dihydroneopterin triphosphate diphosphatase | - |
| QN088_RS09835 () | 2038980..2039720 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| QN088_RS09840 () | 2039757..2040278 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| QN088_RS09845 () | 2040280..2040879 | - | 600 | WP_023209708.1 | YebB family permuted papain-like enzyme | - |
| QN088_RS09850 () | 2041088..2041780 | + | 693 | WP_000227320.1 | hypothetical protein | - |
| QN088_RS09855 () | 2042140..2042751 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| QN088_RS09860 () | 2042760..2043770 | + | 1011 | WP_000568504.1 | Holliday junction branch migration DNA helicase RuvB | - |
| QN088_RS09865 () | 2043849..2044634 | - | 786 | WP_000571506.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| QN088_RS09870 () | 2044631..2045386 | - | 756 | WP_000203023.1 | Zinc import ATP-binding protein ZnuC | VF |
| QN088_RS09875 () | 2045465..2046409 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| QN088_RS09880 () | 2046425..2047744 | + | 1320 | WP_001184032.1 | murein DD-endopeptidase MepM | - |
| QN088_RS09885 () | 2047861..2048832 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| QN088_RS09890 () | 2048905..2050347 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| QN088_RS09895 () | 2050471..2051340 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| QN088_RS09900 () | 2051682..2053157 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| QN088_RS09905 () | 2053392..2055203 | + | 1812 | WP_001069111.1 | phosphogluconate dehydratase | - |
| QN088_RS09910 () | 2055241..2055882 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QN088_RS09915 () | 2055982..2057160 | - | 1179 | WP_000173430.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QN088_RS09920 () | 2057291..2057581 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| QN088_RS09925 () | 2057649..2058002 | + | 354 | WP_023204510.1 | protein YebF | - |
| QN088_RS09930 () | 2058096..2058755 | + | 660 | WP_000024709.1 | tellurite resistance TerB family protein | - |
| QN088_RS09935 () | 2058969..2061020 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| QN088_RS09940 () | 2061057..2061755 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| QN088_RS09945 () | 2061779..2062435 | - | 657 | WP_000100256.1 | nitrilase-related carbon-nitrogen hydrolase | - |
| QN088_RS09950 () | 2062543..2062773 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| QN088_RS09955 () | 2062911..2063285 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| QN088_RS09960 () | 2063286..2064161 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| QN088_RS09965 () | 2064178..2064531 | + | 354 | WP_000722367.1 | YebY family protein | - |
| - | 2064631..2064776 | - | 146 | - | - | Antitoxin Detail |
| - | 2064671..2064774 | + | 104 | - | - | Toxin Detail |
| QN088_RS09970 () | 2064914..2065993 | - | 1080 | WP_038803962.1 | hypothetical protein ; Integrase | Integrase |
| QN088_RS09975 () | 2066026..2067177 | - | 1152 | Protein_1950 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| QN088_RS09980 () | 2067166..2067357 | + | 192 | Protein_1951 | glycoside hydrolase family 19 protein | - |
| QN088_RS09985 () | 2067411..2067944 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| QN088_RS09990 () | 2068201..2068368 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| QN088_RS09995 () | 2068676..2068936 | + | 261 | Protein_1954 | DUF1441 family protein | - |
| QN088_RS10000 () | 2068938..2069153 | + | 216 | Protein_1955 | shikimate transporter | - |
| QN088_RS10005 () | 2069151..2069495 | + | 345 | Protein_1956 | macro domain-containing protein | - |
| QN088_RS10010 () | 2069505..2069975 | + | 471 | Protein_1957 | tail fiber assembly protein | - |
| QN088_RS10015 () | 2070072..2070272 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| QN088_RS10020 () | 2070662..2070842 | - | 181 | Protein_1959 | IS3 family transposase | - |
| QN088_RS10025 () | 2070842..2070967 | + | 126 | WP_001652642.1 | hypothetical protein | - |
| QN088_RS10030 () | 2071481..2071627 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| QN088_RS10035 () | 2071621..2071788 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| QN088_RS10040 () | 2072115..2072729 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| QN088_RS10045 () | 2072739..2072897 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| QN088_RS10050 () | 2073030..2073944 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| QN088_RS10055 () | 2075239..2075660 | - | 422 | Protein_1966 | tyrosine-type recombinase/integrase | - |
| QN088_RS10060 () | 2075731..2076925 | + | 1195 | Protein_1967 | IS256 family transposase IS285 | Transposase |
| QN088_RS10065 () | 2077071..2077211 | - | 141 | WP_079986565.1 | hypothetical protein | - |
| QN088_RS10070 () | 2077377..2077646 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| QN088_RS10075 () | 2078016..2078435 | + | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| QN088_RS10080 () | 2078808..2079284 | - | 477 | WP_000030945.1 | hypothetical protein | - |
| QN088_RS10085 () | 2079612..2080007 | - | 396 | WP_000422879.1 | DUF1398 domain-containing protein | - |
| QN088_RS10090 () | 2080691..2081413 | + | 723 | WP_000182074.1 | Guanine nucleotide exchange factor sopE2 | VF |
| QN088_RS10095 () | 2081698..2081862 | + | 165 | WP_001134856.1 | membrane protein | - |
| QN088_RS10100 () | 2082086..2082736 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| QN088_RS10105 () | 2082755..2082946 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| QN088_RS10110 () | 2083057..2083293 | - | 237 | WP_024131108.1 | YebV family protein | - |
| QN088_RS10115 () | 2083411..2084850 | - | 1440 | WP_024132151.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QN088_RS10120 () | 2084928..2087561 | - | 2634 | WP_001521100.1 | Intermembrane transport protein YebT | VF |
| QN088_RS10125 () | 2087530..2088813 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| QN088_RS10130 () | 2088942..2089439 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| QN088_RS10135 () | 2089537..2090223 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| QN088_RS10140 () | 2090243..2092291 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| QN088_RS10145 () | 2092485..2093366 | + | 882 | WP_000984498.1 | protease HtpX | - |
| QN088_RS10150 () | 2093414..2094787 | - | 1374 | WP_284546287.1 | MFS transporter | - |
| QN088_RS10155 () | 2094963..2095754 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| QN088_RS10160 () | 2095966..2096205 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| QN088_RS10165 () | 2096363..2096506 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| QN088_RS10170 () | 2096577..2096864 | + | 288 | WP_001000660.1 | YebO family protein | - |
| QN088_RS10175 () | 2097513..2097656 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| QN088_RS10180 () | 2097669..2097877 | + | 209 | Protein_1991 | transcription antiterminator/RNA stability regulator CspE | - |
| QN088_RS10185 () | 2098097..2099842 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| QN088_RS10190 () | 2099908..2100717 | + | 810 | WP_284546288.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| QN088_RS10195 () | 2100714..2101280 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| QN088_RS10200 () | 2101690..2102148 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|