MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 20919 bp
Accession: NZ_CP124576 Location: 2880635..2901553 Organism: Sphingobium sp. AP49 Replicon: chromosome
Accession: NZ_CP124576 Location: 2880635..2901553 Organism: Sphingobium sp. AP49 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PMI04_RS13700 (PMI04_013700) | 2876091..2876828 | - | 738 | WP_007706268.1 | peptidase | - |
| PMI04_RS13705 (PMI04_013705) | 2876858..2877721 | - | 864 | WP_007706264.1 | transglutaminase family protein | - |
| PMI04_RS13710 (PMI04_013710) | 2877740..2878672 | - | 933 | WP_007706261.1 | alpha-E domain-containing protein | - |
| PMI04_RS13715 (PMI04_013715) | 2878764..2880173 | - | 1410 | WP_007706258.1 | circularly permuted type 2 ATP-grasp protein | - |
| PMI04_RS13725 (PMI04_013725) | 2880935..2882524 | + | 1590 | WP_037485541.1 | class I SAM-dependent DNA methyltransferase | - |
| PMI04_RS13730 (PMI04_013730) | 2882514..2883734 | + | 1221 | WP_007706251.1 | restriction endonuclease subunit S | - |
| PMI04_RS13735 (PMI04_013735) | 2883746..2884432 | + | 687 | WP_007706248.1 | abortive infection family protein | - |
| PMI04_RS13740 (PMI04_013740) | 2884429..2887575 | + | 3147 | WP_007706244.1 | type I restriction endonuclease subunit R | - |
| PMI04_RS13745 (PMI04_013745) | 2887603..2888364 | - | 762 | WP_007706241.1 | DUF6118 family protein | - |
| PMI04_RS13750 (PMI04_013750) | 2888383..2891376 | - | 2994 | WP_007706238.1 | Ti-type conjugative transfer relaxase TraA | - |
| PMI04_RS13755 (PMI04_013755) | 2891550..2891855 | + | 306 | WP_007706235.1 | conjugal transfer protein TraD | - |
| PMI04_RS13760 (PMI04_013760) | 2891878..2892108 | + | 231 | WP_007706233.1 | conjugal transfer protein TraD | - |
| PMI04_RS13765 (PMI04_013765) | 2892105..2893619 | - | 1515 | WP_007706230.1 | hypothetical protein | - |
| PMI04_RS13770 (PMI04_013770) | 2893616..2894230 | - | 615 | WP_007706227.1 | hypothetical protein | - |
| PMI04_RS13775 (PMI04_013775) | 2894386..2894643 | + | 258 | WP_007706222.1 | hypothetical protein | - |
| PMI04_RS13780 (PMI04_013780) | 2895059..2896159 | + | 1101 | WP_007706220.1 | DUF262 domain-containing protein | - |
| PMI04_RS13785 (PMI04_013785) | 2896156..2897277 | + | 1122 | WP_007706217.1 | DUF3696 domain-containing protein | - |
| PMI04_RS13790 (PMI04_013790) | 2897323..2898189 | + | 867 | WP_157178078.1 | hypothetical protein | - |
| PMI04_RS13795 (PMI04_013795) | 2898584..2898889 | - | 306 | WP_007706215.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| PMI04_RS13800 (PMI04_013800) | 2898886..2899191 | - | 306 | WP_007706214.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PMI04_RS13805 (PMI04_013805) | 2899740..2899955 | + | 216 | WP_081490990.1 | AlpA family phage regulatory protein | - |
| PMI04_RS13810 (PMI04_013810) | 2899952..2900146 | + | 195 | WP_007706212.1 | helix-turn-helix domain-containing protein | - |
| PMI04_RS13815 (PMI04_013815) | 2900121..2901335 | - | 1215 | WP_037485537.1 | Prophage integrase IntA ; Integrase | Integrase |
| PMI04_RS13820 (PMI04_013820) | 2901843..2902673 | + | 831 | WP_007706204.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| PMI04_RS13825 (PMI04_013825) | 2903094..2905205 | + | 2112 | WP_007706195.1 | TonB-dependent receptor plug domain-containing protein | - |
| PMI04_RS13830 (PMI04_013830) | 2905519..2905827 | + | 309 | WP_052028034.1 | PadR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|