MGE detailed information
MGE type: Genomic_island MGE length: 40924 bp
Accession: NZ_CP124511 Location: 2401893..2442816 Organism: Escherichia coli strain AVS0501 Replicon: chromosome
Accession: NZ_CP124511 Location: 2401893..2442816 Organism: Escherichia coli strain AVS0501 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP59_RS12025 (2397325) | 2397325..2398143 | - | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QJP59_RS12030 (2398166) | 2398166..2398744 | - | 579 | WP_282517614.1 | TetR/AcrR family transcriptional regulator | - |
| QJP59_RS12040 (2400722) | 2400722..2401900 | + | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QJP59_RS12045 (2401893) | 2401893..2403344 | + | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QJP59_RS12050 (2403419) | 2403419..2403552 | - | 134 | Protein_2369 | phosphate-starvation-inducible protein PsiE | - |
| QJP59_RS12055 (2403554) | 2403554..2403670 | - | 117 | Protein_2370 | phosphoporin PhoE | - |
| QJP59_RS12060 (2403968) | 2403968..2404602 | + | 635 | Protein_2371 | IS3 family transposase IS2 | Transposase |
| QJP59_RS12065 (2404658) | 2404658..2405536 | - | 879 | WP_000769117.1 | restriction endonuclease | - |
| QJP59_RS12070 (2405864) | 2405864..2406595 | - | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| QJP59_RS12075 (2408078) | 2408078..2409301 | - | 1224 | WP_001107221.1 | hypothetical protein | - |
| QJP59_RS12080 (2409402) | 2409402..2410286 | + | 885 | WP_000010377.1 | YfjP family GTPase | - |
| QJP59_RS12085 (2410489) | 2410489..2411169 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJP59_RS12090 (2411317) | 2411317..2411994 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QJP59_RS12095 (2412000) | 2412000..2412233 | + | 234 | WP_001278280.1 | DUF905 family protein | - |
| QJP59_RS12100 (2412323) | 2412323..2413141 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| QJP59_RS12105 (2413232) | 2413232..2413717 | + | 486 | WP_001588934.1 | antirestriction protein | - |
| QJP59_RS12110 (2413732) | 2413732..2414208 | + | 477 | WP_001588933.1 | RadC family protein | - |
| QJP59_RS12115 (2414277) | 2414277..2414498 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| QJP59_RS12120 (2414577) | 2414577..2414945 | + | 369 | WP_024186867.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP59_RS12125 (2415035) | 2415035..2415412 | + | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP59_RS12130 (2415409) | 2415409..2415897 | + | 489 | WP_000761667.1 | DUF5983 family protein | - |
| QJP59_RS12135 (2415909) | 2415909..2416106 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| QJP59_RS12140 (2416191) | 2416191..2417045 | + | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| QJP59_RS12145 (2417363) | 2417363..2417522 | + | 160 | Protein_2388 | integrase | - |
| QJP59_RS12150 (2417782) | 2417782..2419320 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP59_RS12155 (2419686) | 2419686..2421020 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP59_RS12160 (2421100) | 2421100..2423247 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP59_RS12165 (2423306) | 2423306..2424763 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP59_RS12170 (2425000) | 2425000..2426517 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP59_RS12175 (2426636) | 2426636..2426809 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP59_RS12180 (2426837) | 2426837..2427133 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP59_RS12185 (2427361) | 2427361..2427633 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJP59_RS12190 (2427847) | 2427847..2431776 | - | 3930 | WP_001080127.1 | Serine protease EspC | VF |
| QJP59_RS12195 (2432931) | 2432931..2433761 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP59_RS12200 (2434659) | 2434659..2438510 | - | 3852 | WP_012896891.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP59_RS12205 (2438916) | 2438916..2439485 | + | 570 | WP_282517615.1 | hypothetical protein | - |
| QJP59_RS12210 (2439547) | 2439547..2440251 | + | 705 | WP_001227591.1 | putative fimbrial chaperone YraI | VF |
| QJP59_RS12215 (2440279) | 2440279..2442816 | + | 2538 | WP_000866257.1 | Outer membrane usher protein FimD | VF |
| QJP59_RS12220 (2442926) | 2442926..2443198 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP59_RS12225 (2443210) | 2443210..2443440 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP59_RS12230 (2443621) | 2443621..2445252 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJP59_RS12235 (2445249) | 2445249..2445968 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|