MGE detailed information
MGE type: Genomic_island MGE length: 24942 bp
Accession: NZ_CP124420 Location: 3700117..3725058 Organism: Escherichia coli strain AVS0155 Replicon: chromosome
Accession: NZ_CP124420 Location: 3700117..3725058 Organism: Escherichia coli strain AVS0155 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP63_RS18075 (3696965) | 3696965..3697684 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJP63_RS18080 (3697681) | 3697681..3699312 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJP63_RS18085 (3699493) | 3699493..3699723 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP63_RS18090 (3699735) | 3699735..3700007 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP63_RS18095 (3700117) | 3700117..3702654 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| QJP63_RS18100 (3702687) | 3702687..3703379 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| QJP63_RS18105 (3703444) | 3703444..3703968 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJP63_RS18110 (3704369) | 3704369..3708181 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP63_RS18115 (3709079) | 3709079..3709909 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP63_RS18120 (3711065) | 3711065..3714994 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| QJP63_RS18125 (3715208) | 3715208..3715480 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJP63_RS18130 (3715708) | 3715708..3716004 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP63_RS18135 (3716032) | 3716032..3716205 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP63_RS18140 (3716324) | 3716324..3717841 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP63_RS18145 (3718078) | 3718078..3719535 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP63_RS18150 (3719594) | 3719594..3721741 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP63_RS18155 (3721821) | 3721821..3723155 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP63_RS18160 (3723521) | 3723521..3725058 | - | 1538 | Protein_3554 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP63_RS18165 (3725318) | 3725318..3725477 | - | 160 | Protein_3555 | integrase | - |
| QJP63_RS18175 (3725857) | 3725857..3726432 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| QJP63_RS18180 (3726469) | 3726469..3728166 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| QJP63_RS18185 (3728142) | 3728142..3728480 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| QJP63_RS18190 (3728596) | 3728596..3729897 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|