MGE detailed information
MGE type: Genomic_island MGE length: 24943 bp
Accession: NZ_CP124405 Location: 3146314..3171256 Organism: Escherichia coli strain AVS0935 Replicon: chromosome
Accession: NZ_CP124405 Location: 3146314..3171256 Organism: Escherichia coli strain AVS0935 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB05_RS15000 (3143162) | 3143162..3143881 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJB05_RS15005 (3143878) | 3143878..3145509 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJB05_RS15010 (3145690) | 3145690..3145920 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJB05_RS15015 (3145932) | 3145932..3146204 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJB05_RS15020 (3146314) | 3146314..3148851 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| QJB05_RS15025 (3148884) | 3148884..3149576 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| QJB05_RS15030 (3149641) | 3149641..3150165 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJB05_RS15035 (3150566) | 3150566..3154378 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJB05_RS15040 (3155276) | 3155276..3156106 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJB05_RS15045 (3157263) | 3157263..3161192 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| QJB05_RS15050 (3161406) | 3161406..3161678 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJB05_RS15055 (3161906) | 3161906..3162202 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJB05_RS15060 (3162230) | 3162230..3162403 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJB05_RS15065 (3162522) | 3162522..3164039 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJB05_RS15070 (3164276) | 3164276..3165733 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJB05_RS15075 (3165792) | 3165792..3167939 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJB05_RS15080 (3168019) | 3168019..3169353 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJB05_RS15085 (3169719) | 3169719..3171256 | - | 1538 | Protein_2943 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJB05_RS15090 (3171516) | 3171516..3171675 | - | 160 | Protein_2944 | integrase | - |
| QJB05_RS15100 (3172055) | 3172055..3172630 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| QJB05_RS15105 (3172667) | 3172667..3174364 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| QJB05_RS15110 (3174340) | 3174340..3174678 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| QJB05_RS15115 (3174794) | 3174794..3176095 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|