MGE detailed information
MGE type: Genomic_island MGE length: 27909 bp
Accession: NZ_CP124359 Location: 2944870..2972778 Organism: Escherichia coli strain AVS0093 Replicon: chromosome
Accession: NZ_CP124359 Location: 2944870..2972778 Organism: Escherichia coli strain AVS0093 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP83_RS14380 (2940199) | 2940199..2941791 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| QJP83_RS14385 (2941788) | 2941788..2941994 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| QJP83_RS14390 (2941978) | 2941978..2943906 | - | 1929 | WP_060624626.1 | phage terminase large subunit family protein | - |
| QJP83_RS14395 (2943878) | 2943878..2944387 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| QJP83_RS14400 (2945002) | 2945002..2945139 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| QJP83_RS14405 (2945346) | 2945346..2945672 | - | 327 | WP_000830178.1 | TonB family protein | - |
| QJP83_RS14410 (2945983) | 2945983..2946450 | - | 468 | WP_064773083.1 | lysis protein | - |
| QJP83_RS14415 (2946453) | 2946453..2946584 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| QJP83_RS14420 (2946599) | 2946599..2946781 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| QJP83_RS14425 (2946938) | 2946938..2947471 | - | 534 | WP_001092866.1 | lysozyme | - |
| QJP83_RS14430 (2948063) | 2948063..2948398 | - | 336 | Protein_2837 | YdfR family protein | - |
| QJP83_RS14435 (2948403) | 2948403..2948618 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| QJP83_RS14440 (2948768) | 2948768..2948929 | - | 162 | WP_001309421.1 | hypothetical protein | - |
| QJP83_RS14445 (2948929) | 2948929..2949114 | - | 186 | Protein_2840 | DUF1737 domain-containing protein | - |
| QJP83_RS14450 (2949375) | 2949375..2949710 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| QJP83_RS14455 (2949781) | 2949781..2949897 | + | 117 | Protein_2842 | hypothetical protein | - |
| QJP83_RS14460 (2949991) | 2949991..2950122 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| QJP83_RS14475 (2950927) | 2950927..2951976 | - | 1050 | WP_001563803.1 | site-specific DNA-methyltransferase | - |
| QJP83_RS14480 (2952127) | 2952127..2952324 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| QJP83_RS14485 (2952551) | 2952551..2953372 | - | 822 | WP_032265151.1 | antitermination protein | - |
| QJP83_RS14490 (2953369) | 2953369..2953749 | - | 381 | WP_094315389.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QJP83_RS14495 (2953750) | 2953750..2954805 | - | 1056 | WP_094315388.1 | DUF968 domain-containing protein | - |
| QJP83_RS14500 (2954807) | 2954807..2955085 | - | 279 | WP_001410105.1 | hypothetical protein | - |
| QJP83_RS14505 (2955244) | 2955244..2955318 | - | 75 | Protein_2850 | hypothetical protein | - |
| QJP83_RS14510 (2955476) | 2955476..2956579 | - | 1104 | WP_000401168.1 | XRE family transcriptional regulator | - |
| QJP83_RS14515 (2956560) | 2956560..2957210 | - | 651 | WP_001004956.1 | hypothetical protein | - |
| QJP83_RS14520 (2957376) | 2957376..2957531 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QJP83_RS14525 (2957823) | 2957823..2958167 | - | 345 | WP_000206826.1 | hypothetical protein | - |
| QJP83_RS14530 (2958164) | 2958164..2958331 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP83_RS14535 (2958342) | 2958342..2958605 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP83_RS14540 (2958607) | 2958607..2958825 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP83_RS14545 (2958827) | 2958827..2959042 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP83_RS14550 (2959043) | 2959043..2959402 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP83_RS14555 (2959399) | 2959399..2959575 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP83_RS14560 (2959568) | 2959568..2959750 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP83_RS14565 (2959879) | 2959879..2960190 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP83_RS14570 (2960183) | 2960183..2960437 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP83_RS14575 (2960434) | 2960434..2960856 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP83_RS14580 (2960897) | 2960897..2961859 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP83_RS14585 (2961882) | 2961882..2962307 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP83_RS14590 (2962304) | 2962304..2962606 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP83_RS14595 (2962705) | 2962705..2963076 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP83_RS14600 (2963097) | 2963097..2963288 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| QJP83_RS14605 (2963290) | 2963290..2963568 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QJP83_RS14610 (2963860) | 2963860..2964012 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP83_RS14615 (2964024) | 2964024..2964362 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP83_RS14620 (2964351) | 2964351..2964545 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP83_RS14625 (2965112) | 2965112..2965300 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP83_RS14630 (2965297) | 2965297..2965485 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP83_RS14635 (2965581) | 2965581..2968052 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP83_RS14640 (2968114) | 2968114..2968383 | + | 270 | WP_000003742.1 | excisionase | - |
| QJP83_RS14645 (2968352) | 2968352..2969470 | + | 1119 | WP_000074983.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC ; Integrase | Integrase |
| QJP83_RS14650 (2969637) | 2969637..2970431 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| QJP83_RS14655 (2970428) | 2970428..2971474 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| QJP83_RS14660 (2971532) | 2971532..2971993 | + | 462 | WP_001295970.1 | DUF3592 domain-containing protein | - |
| QJP83_RS14665 (2971990) | 2971990..2972778 | + | 789 | WP_000720215.1 | TPM domain-containing protein | - |
| QJP83_RS14670 (2972916) | 2972916..2973737 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| QJP83_RS14675 (2973753) | 2973753..2974664 | - | 912 | WP_000291272.1 | N-acetylglucosamine kinase | - |
| QJP83_RS14680 (2974693) | 2974693..2975937 | - | 1245 | WP_023141434.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| QJP83_RS14685 (2975937) | 2975937..2976638 | - | 702 | WP_001033695.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|