MGE detailed information
MGE type: Genomic_island MGE length: 40924 bp
Accession: NZ_CP124357 Location: 4519269..4560192 Organism: Escherichia coli strain AVS0467 Replicon: chromosome
Accession: NZ_CP124357 Location: 4519269..4560192 Organism: Escherichia coli strain AVS0467 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP58_RS21995 (4514701) | 4514701..4515519 | - | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QJP58_RS22000 (4515542) | 4515542..4516120 | - | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| QJP58_RS22010 (4518098) | 4518098..4519276 | + | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QJP58_RS22015 (4519269) | 4519269..4520720 | + | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QJP58_RS22020 (4520795) | 4520795..4520928 | - | 134 | Protein_4319 | phosphate-starvation-inducible protein PsiE | - |
| QJP58_RS22025 (4520930) | 4520930..4521046 | - | 117 | Protein_4320 | phosphoporin PhoE | - |
| QJP58_RS22030 (4521344) | 4521344..4521978 | + | 635 | Protein_4321 | IS3 family transposase IS2 | Transposase |
| QJP58_RS22035 (4522034) | 4522034..4522912 | - | 879 | WP_000769117.1 | restriction endonuclease | - |
| QJP58_RS22040 (4523240) | 4523240..4523971 | - | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| QJP58_RS22045 (4525454) | 4525454..4526677 | - | 1224 | WP_001107221.1 | hypothetical protein | - |
| QJP58_RS22050 (4526778) | 4526778..4527662 | + | 885 | WP_000010377.1 | YfjP family GTPase | - |
| QJP58_RS22055 (4527865) | 4527865..4528545 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJP58_RS22060 (4528693) | 4528693..4529370 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QJP58_RS22065 (4529376) | 4529376..4529609 | + | 234 | WP_001278280.1 | DUF905 family protein | - |
| QJP58_RS22070 (4529699) | 4529699..4530517 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| QJP58_RS22075 (4530608) | 4530608..4531093 | + | 486 | WP_001588934.1 | antirestriction protein | - |
| QJP58_RS22080 (4531108) | 4531108..4531584 | + | 477 | WP_001588933.1 | RadC family protein | - |
| QJP58_RS22085 (4531653) | 4531653..4531874 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| QJP58_RS22090 (4531953) | 4531953..4532321 | + | 369 | WP_024186867.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP58_RS22095 (4532411) | 4532411..4532788 | + | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP58_RS22100 (4532785) | 4532785..4533273 | + | 489 | WP_000761667.1 | DUF5983 family protein | - |
| QJP58_RS22105 (4533285) | 4533285..4533482 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| QJP58_RS22110 (4533567) | 4533567..4534421 | + | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| QJP58_RS22115 (4534739) | 4534739..4534898 | + | 160 | Protein_4338 | integrase | - |
| QJP58_RS22120 (4535158) | 4535158..4536696 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP58_RS22125 (4537062) | 4537062..4538396 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP58_RS22130 (4538476) | 4538476..4540623 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP58_RS22135 (4540682) | 4540682..4542139 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP58_RS22140 (4542376) | 4542376..4543893 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP58_RS22145 (4544012) | 4544012..4544185 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP58_RS22150 (4544213) | 4544213..4544509 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP58_RS22155 (4544737) | 4544737..4545009 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJP58_RS22160 (4545223) | 4545223..4549152 | - | 3930 | WP_001080127.1 | hypothetical protein | VF |
| QJP58_RS22165 (4550307) | 4550307..4551137 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP58_RS22170 (4552035) | 4552035..4555886 | - | 3852 | WP_012896891.1 | hypothetical protein | VF |
| QJP58_RS22175 (4556292) | 4556292..4556861 | + | 570 | WP_001035569.1 | hypothetical protein | - |
| QJP58_RS22180 (4556923) | 4556923..4557627 | + | 705 | WP_001227591.1 | hypothetical protein | VF |
| QJP58_RS22185 (4557655) | 4557655..4560192 | + | 2538 | WP_000866257.1 | hypothetical protein | VF |
| QJP58_RS22190 (4560302) | 4560302..4560574 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP58_RS22195 (4560586) | 4560586..4560816 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP58_RS22200 (4560997) | 4560997..4562628 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJP58_RS22205 (4562625) | 4562625..4563344 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|