MGE detailed information
MGE type: Genomic_island MGE length: 40924 bp
Accession: NZ_CP124343 Location: 4525788..4566711 Organism: Escherichia coli strain AVS0533 Replicon: chromosome
Accession: NZ_CP124343 Location: 4525788..4566711 Organism: Escherichia coli strain AVS0533 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP85_RS22070 (4521220) | 4521220..4522038 | - | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QJP85_RS22075 (4522061) | 4522061..4522639 | - | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| QJP85_RS22085 (4524617) | 4524617..4525795 | + | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QJP85_RS22090 (4525788) | 4525788..4527239 | + | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QJP85_RS22095 (4527314) | 4527314..4527447 | - | 134 | Protein_4335 | phosphate-starvation-inducible protein PsiE | - |
| QJP85_RS22100 (4527449) | 4527449..4527565 | - | 117 | Protein_4336 | phosphoporin PhoE | - |
| QJP85_RS22105 (4527863) | 4527863..4528497 | + | 635 | Protein_4337 | IS3 family transposase IS2 | Transposase |
| QJP85_RS22110 (4528553) | 4528553..4529431 | - | 879 | WP_000769117.1 | restriction endonuclease | - |
| QJP85_RS22115 (4529759) | 4529759..4530490 | - | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| QJP85_RS22120 (4531973) | 4531973..4533196 | - | 1224 | WP_001107221.1 | hypothetical protein | - |
| QJP85_RS22125 (4533297) | 4533297..4534181 | + | 885 | WP_000010377.1 | YfjP family GTPase | - |
| QJP85_RS22130 (4534384) | 4534384..4535064 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJP85_RS22135 (4535212) | 4535212..4535889 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QJP85_RS22140 (4535895) | 4535895..4536128 | + | 234 | WP_001278280.1 | DUF905 family protein | - |
| QJP85_RS22145 (4536218) | 4536218..4537036 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| QJP85_RS22150 (4537127) | 4537127..4537612 | + | 486 | WP_001588934.1 | antirestriction protein | - |
| QJP85_RS22155 (4537627) | 4537627..4538103 | + | 477 | WP_001588933.1 | RadC family protein | - |
| QJP85_RS22160 (4538172) | 4538172..4538393 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| QJP85_RS22165 (4538472) | 4538472..4538840 | + | 369 | WP_024186867.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP85_RS22170 (4538930) | 4538930..4539307 | + | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP85_RS22175 (4539304) | 4539304..4539792 | + | 489 | WP_000761667.1 | DUF5983 family protein | - |
| QJP85_RS22180 (4539804) | 4539804..4540001 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| QJP85_RS22185 (4540086) | 4540086..4540940 | + | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| QJP85_RS22190 (4541258) | 4541258..4541417 | + | 160 | Protein_4354 | integrase | - |
| QJP85_RS22195 (4541677) | 4541677..4543215 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP85_RS22200 (4543581) | 4543581..4544915 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP85_RS22205 (4544995) | 4544995..4547142 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP85_RS22210 (4547201) | 4547201..4548658 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP85_RS22215 (4548895) | 4548895..4550412 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP85_RS22220 (4550531) | 4550531..4550704 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP85_RS22225 (4550732) | 4550732..4551028 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP85_RS22230 (4551256) | 4551256..4551528 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJP85_RS22235 (4551742) | 4551742..4555671 | - | 3930 | WP_001080127.1 | Transcriptional regulatory protein WalR | VF |
| QJP85_RS22240 (4556826) | 4556826..4557656 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP85_RS22245 (4558554) | 4558554..4562405 | - | 3852 | WP_012896891.1 | hypothetical protein | VF |
| QJP85_RS22250 (4562811) | 4562811..4563380 | + | 570 | WP_001035569.1 | hypothetical protein | - |
| QJP85_RS22255 (4563442) | 4563442..4564146 | + | 705 | WP_001227591.1 | putative fimbrial chaperone YraI | VF |
| QJP85_RS22260 (4564174) | 4564174..4566711 | + | 2538 | WP_000866257.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | VF |
| QJP85_RS22265 (4566821) | 4566821..4567093 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP85_RS22270 (4567105) | 4567105..4567335 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP85_RS22275 (4567516) | 4567516..4569147 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJP85_RS22280 (4569144) | 4569144..4569863 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|