MGE detailed information
MGE type: Genomic_island MGE length: 24426 bp
Accession: NZ_CP124328 Location: 4014092..4038517 Organism: Escherichia coli strain AVS0787 Replicon: chromosome
Accession: NZ_CP124328 Location: 4014092..4038517 Organism: Escherichia coli strain AVS0787 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP62_RS19925 (4009264) | 4009264..4010609 | + | 1346 | Protein_3902 | IS4-like element IS4 family transposase | - |
| QJP62_RS19930 (4010790) | 4010790..4011206 | + | 417 | Protein_3903 | general secretion pathway protein GspK | - |
| QJP62_RS19935 (4011203) | 4011203..4012380 | + | 1178 | Protein_3904 | type II secretion system protein GspL | - |
| QJP62_RS19940 (4012382) | 4012382..4012918 | + | 537 | WP_000942819.1 | GspM family type II secretion system protein YghD | - |
| QJP62_RS19945 (4014092) | 4014092..4014868 | + | 777 | WP_000124284.1 | hypothetical protein | VF |
| QJP62_RS19950 (4014865) | 4014865..4015536 | + | 672 | WP_000590253.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| QJP62_RS19955 (4015548) | 4015548..4015943 | + | 396 | WP_001233350.1 | Bifunctional protein HldE | VF |
| QJP62_RS19960 (4015959) | 4015959..4017194 | + | 1236 | WP_000668515.1 | hypothetical protein | - |
| QJP62_RS19965 (4017248) | 4017248..4021048 | + | 3801 | WP_000927647.1 | Glycosyltransferase Gtf1 | VF |
| QJP62_RS19970 (4021151) | 4021151..4022179 | + | 1029 | WP_001044673.1 | hypothetical protein | VF |
| QJP62_RS19975 (4022185) | 4022185..4023180 | + | 996 | WP_001208051.1 | hypothetical protein | - |
| QJP62_RS19980 (4023342) | 4023342..4024580 | - | 1239 | WP_001161824.1 | hypothetical protein | VF |
| QJP62_RS19985 (4024615) | 4024615..4026642 | - | 2028 | WP_029700839.1 | hypothetical protein | VF |
| QJP62_RS19990 (4026639) | 4026639..4027379 | - | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| QJP62_RS19995 (4027389) | 4027389..4029065 | - | 1677 | WP_001327874.1 | hypothetical protein | VF |
| QJP62_RS20000 (4029089) | 4029089..4030237 | - | 1149 | WP_000905920.1 | hypothetical protein | VF |
| QJP62_RS20005 (4030309) | 4030309..4031292 | - | 984 | WP_029700842.1 | Inosine-5'-monophosphate dehydrogenase | VF |
| QJP62_RS20010 (4032103) | 4032103..4032273 | - | 171 | Protein_3919 | IS110 family transposase ISEc32 | Transposase |
| QJP62_RS20015 (4032690) | 4032690..4033623 | - | 934 | Protein_3920 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| QJP62_RS20020 (4033616) | 4033616..4034011 | - | 396 | WP_000208384.1 | DUF6088 family protein | - |
| QJP62_RS20025 (4034080) | 4034080..4034925 | - | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| QJP62_RS20030 (4035010) | 4035010..4035207 | - | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| QJP62_RS20035 (4035224) | 4035224..4035712 | - | 489 | WP_000761699.1 | DUF5983 family protein | - |
| QJP62_RS20040 (4035709) | 4035709..4036086 | - | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP62_RS20045 (4036175) | 4036175..4036543 | - | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QJP62_RS20050 (4036593) | 4036593..4037237 | - | 645 | WP_000094916.1 | hypothetical protein | - |
| QJP62_RS20055 (4037256) | 4037256..4037477 | - | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| QJP62_RS20060 (4037540) | 4037540..4038016 | - | 477 | WP_001186726.1 | RadC family protein | - |
| QJP62_RS20065 (4038032) | 4038032..4038517 | - | 486 | WP_000849565.1 | antirestriction protein | - |
| QJP62_RS20070 (4038572) | 4038572..4039390 | - | 819 | WP_001234620.1 | DUF932 domain-containing protein | - |
| QJP62_RS20075 (4039491) | 4039491..4039724 | - | 234 | WP_000902034.1 | DUF905 family protein | - |
| QJP62_RS20080 (4039803) | 4039803..4040258 | - | 456 | WP_000581502.1 | IrmA family protein | - |
| QJP62_RS20085 (4040334) | 4040334..4041461 | - | 1128 | Protein_3934 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|