MGE detailed information
MGE type: Conjugative plasmid MGE length: 65883 bp
Accession: NZ_CP123224 Location: 1..65883 Organism: Pseudomonas amygdali pv. aesculi strain 2250 Replicon: plasmid pPae2250I
Accession: NZ_CP123224 Location: 1..65883 Organism: Pseudomonas amygdali pv. aesculi strain 2250 Replicon: plasmid pPae2250I
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QEP70_RS28465 | 1..666 | + | 666 | WP_010206144.1 | Mobilization protein A | Relaxase |
| QEP70_RS28470 | 728..1189 | - | 462 | WP_005734737.1 | hypothetical protein | - |
| QEP70_RS28475 | 1329..1622 | - | 294 | WP_005730619.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QEP70_RS28480 | 1622..1807 | - | 186 | WP_003348562.1 | hypothetical protein | Antitoxin Detail |
| QEP70_RS28490 | 3314..3586 | - | 273 | WP_060406870.1 | hypothetical protein | - |
| QEP70_RS28495 | 3680..4315 | - | 636 | WP_060406871.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QEP70_RS28500 | 4816..5466 | + | 651 | WP_003344252.1 | ParA family protein | - |
| QEP70_RS28505 | 5547..5837 | + | 291 | WP_010217231.1 | hypothetical protein | - |
| QEP70_RS28510 | 5911..6054 | + | 144 | WP_155511877.1 | hypothetical protein | - |
| QEP70_RS28515 | 6340..7041 | + | 702 | WP_010217228.1 | FadR/GntR family transcriptional regulator | - |
| QEP70_RS28520 | 7118..8314 | + | 1197 | WP_010217226.1 | L-2-hydroxyglutarate oxidase | - |
| QEP70_RS28525 | 8355..9701 | + | 1347 | WP_044319867.1 | MFS transporter | - |
| QEP70_RS28530 | 9757..9942 | + | 186 | WP_004661844.1 | hypothetical protein | - |
| QEP70_RS28535 | 9959..10312 | - | 354 | WP_010217213.1 | helix-turn-helix transcriptional regulator | - |
| QEP70_RS28540 | 10559..11071 | + | 513 | WP_060406872.1 | transcription termination/antitermination NusG family protein | - |
| QEP70_RS28545 | 11160..11372 | + | 213 | WP_060406873.1 | hypothetical protein | - |
| QEP70_RS28550 | 11400..12107 | + | 708 | WP_060406874.1 | hypothetical protein | VF |
| QEP70_RS28555 | 12104..12442 | + | 339 | WP_234785932.1 | conjugal transfer protein | - |
| QEP70_RS28560 | 12455..12943 | + | 489 | WP_060406875.1 | VirB3 family type IV secretion system protein | - |
| QEP70_RS28565 | 12870..15344 | + | 2475 | WP_060409939.1 | VirB4 family type IV secretion system protein | - |
| QEP70_RS28570 | 15341..16027 | + | 687 | WP_010217173.1 | P-type DNA transfer protein VirB5 | - |
| QEP70_RS28575 | 16060..16413 | + | 354 | WP_060406728.1 | hypothetical protein | - |
| QEP70_RS28580 | 16424..17356 | + | 933 | WP_060406729.1 | type IV secretion system protein | - |
| QEP70_RS28585 | 17430..17744 | + | 315 | WP_060409895.1 | hypothetical protein | - |
| QEP70_RS28590 | 17781..18569 | + | 789 | WP_060406730.1 | hypothetical protein | VF |
| QEP70_RS28595 | 18559..19368 | + | 810 | WP_060409894.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| QEP70_RS28600 | 19355..20746 | + | 1392 | WP_060406745.1 | hypothetical protein | VF |
| QEP70_RS28605 | 20756..21811 | + | 1056 | WP_060406746.1 | Type IV secretion system protein VirB11 | VF |
| QEP70_RS28610 | 21825..22211 | + | 387 | WP_054098190.1 | hypothetical protein | - |
| QEP70_RS28615 | 22196..22561 | + | 366 | WP_004667995.1 | hypothetical protein | - |
| QEP70_RS28620 | 22608..22874 | + | 267 | WP_010217138.1 | hypothetical protein | - |
| QEP70_RS28625 | 22994..23227 | + | 234 | WP_010217137.1 | hypothetical protein | - |
| QEP70_RS28630 | 23227..23424 | + | 198 | Protein_33 | hypothetical protein | VF |
| QEP70_RS28635 | 23487..24494 | + | 1008 | WP_010217132.1 | hypothetical protein | - |
| QEP70_RS28640 | 24496..24789 | + | 294 | WP_010217130.1 | hypothetical protein | - |
| QEP70_RS28645 | 24911..25144 | + | 234 | WP_060406747.1 | hypothetical protein | - |
| QEP70_RS28650 | 25144..26805 | + | 1662 | WP_010217644.1 | hypothetical protein | VF |
| QEP70_RS28655 | 26847..27209 | + | 363 | WP_010217641.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QEP70_RS28660 | 27237..29402 | + | 2166 | WP_010217635.1 | type IA DNA topoisomerase | - |
| QEP70_RS28665 | 29429..29713 | + | 285 | WP_010217633.1 | hypothetical protein | - |
| QEP70_RS28670 | 29741..30346 | + | 606 | WP_010217631.1 | single-stranded DNA-binding protein | - |
| QEP70_RS28675 | 30387..30650 | + | 264 | WP_010217629.1 | hypothetical protein | - |
| QEP70_RS28680 | 30953..31672 | + | 720 | WP_010217628.1 | StbB family protein | - |
| QEP70_RS28685 | 31669..32241 | + | 573 | WP_010217627.1 | hypothetical protein | - |
| QEP70_RS28690 | 32256..32645 | - | 390 | WP_010217617.1 | hypothetical protein | - |
| QEP70_RS28695 | 33004..33729 | + | 726 | WP_010217615.1 | relaxosome component | - |
| QEP70_RS28700 | 33719..34414 | + | 696 | Protein_47 | hypothetical protein | Relaxase |
| QEP70_RS28705 | 34716..35135 | + | 420 | WP_010217604.1 | hypothetical protein | Relaxase |
| QEP70_RS28710 | 35450..37492 | + | 2043 | WP_060406752.1 | hypothetical protein | Relaxase |
| QEP70_RS28715 | 38174..38602 | + | 429 | WP_060406748.1 | GntR family transcriptional regulator | - |
| QEP70_RS28720 | 38956..39858 | + | 903 | WP_005730396.1 | hypothetical protein | - |
| QEP70_RS28725 | 39875..40087 | + | 213 | WP_060406749.1 | hypothetical protein | - |
| QEP70_RS28730 | 40485..41798 | + | 1314 | WP_060406750.1 | replication initiation protein | - |
| QEP70_RS28735 | 41982..42275 | + | 294 | WP_060406751.1 | HU family DNA-binding protein | - |
| QEP70_RS28740 | 42333..43555 | + | 1223 | WP_243580940.1 | IS3 family transposase IS51 | Transposase |
| QEP70_RS28745 | 43623..43823 | + | 201 | Protein_56 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QEP70_RS28750 | 43816..44724 | + | 909 | WP_080544818.1 | TauD/TfdA family dioxygenase | - |
| QEP70_RS28755 | 44742..45776 | + | 1035 | WP_005734275.1 | sulfotransferase | - |
| QEP70_RS28760 | 45817..47019 | + | 1203 | WP_005734276.1 | aspartate aminotransferase family protein | - |
| QEP70_RS28765 | 47056..47712 | + | 657 | WP_032701869.1 | 2OG-Fe(II) oxygenase family protein | - |
| QEP70_RS28770 | 47712..48290 | + | 579 | WP_005734277.1 | AAA family ATPase | - |
| QEP70_RS28775 | 48570..48833 | + | 264 | WP_060409930.1 | Tn3 family transposase TnpA_ISYps3 | Transposase |
| QEP70_RS28780 | 48864..49289 | + | 426 | Protein_63 | IS91 family transposase ISPsy3 | Transposase |
| QEP70_RS28785 | 49350..50063 | - | 714 | WP_060406700.1 | YecA family protein | - |
| QEP70_RS28790 | 50094..53069 | - | 2976 | WP_005734742.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| QEP70_RS28795 | 53073..53492 | - | 420 | WP_005734741.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| QEP70_RS28800 | 53492..53731 | - | 240 | WP_010216588.1 | ribbon-helix-helix domain-containing protein | - |
| QEP70_RS28805 | 53938..54861 | + | 924 | WP_060406699.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| QEP70_RS28810 | 55366..62760 | - | 7395 | WP_243580941.1 | XopAD/skwp family type III secretion system effector | - |
| QEP70_RS28815 | 62924..63864 | - | 941 | Protein_70 | IS3 family transposase IS51 | Transposase |
| QEP70_RS28820 | 63877..64110 | - | 234 | WP_060409948.1 | hypothetical protein | - |
| QEP70_RS28825 | 64382..64951 | + | 570 | WP_234785935.1 | recombinase family protein | - |
| QEP70_RS28830 | 65186..65293 | + | 108 | Protein_73 | resolvase | - |
| QEP70_RS28835 | 65388..65660 | + | 273 | WP_044322702.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|