MGE detailed information
MGE type: Conjugative plasmid MGE length: 68092 bp
Accession: NZ_CP122718 Location: 1..68092 Organism: Escherichia coli strain ETEC1749 Replicon: plasmid unnamed6
Accession: NZ_CP122718 Location: 1..68092 Organism: Escherichia coli strain ETEC1749 Replicon: plasmid unnamed6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX02_RS28105 (QDX02_28105) | 1..3225 | + | 3225 | WP_282842698.1 | hypothetical protein | VF |
| QDX02_RS28110 (QDX02_28110) | 3319..3861 | + | 543 | WP_001005723.1 | hypothetical protein | - |
| QDX02_RS28115 (QDX02_28115) | 4276..4585 | + | 310 | Protein_2 | transposase | - |
| QDX02_RS28120 (QDX02_28120) | 4669..5226 | + | 558 | WP_000735639.1 | Attachment invasion locus protein | VF |
| QDX02_RS28125 (QDX02_28125) | 5408..5782 | - | 375 | WP_000604346.1 | PIN domain-containing protein | Toxin Detail |
| QDX02_RS28130 (QDX02_28130) | 5779..5982 | - | 204 | WP_001261052.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QDX02_RS28135 (QDX02_28135) | 6086..8098 | - | 2013 | WP_000635641.1 | hypothetical protein | Relaxase |
| QDX02_RS28140 (QDX02_28140) | 8104..8439 | - | 336 | WP_000045231.1 | plasmid mobilization protein MobA | - |
| QDX02_RS28145 (QDX02_28145) | 8709..9023 | + | 315 | WP_000741300.1 | hypothetical protein | - |
| QDX02_RS28150 (QDX02_28150) | 9640..9810 | + | 171 | WP_071881852.1 | helix-turn-helix domain-containing protein | - |
| QDX02_RS28155 (QDX02_28155) | 9855..10491 | - | 637 | Protein_10 | DUF4942 domain-containing protein | - |
| QDX02_RS28160 (QDX02_28160) | 10546..10803 | - | 258 | WP_000174705.1 | hypothetical protein | - |
| QDX02_RS28165 (QDX02_28165) | 10917..11159 | - | 243 | WP_000540594.1 | hypothetical protein | - |
| QDX02_RS28170 (QDX02_28170) | 11426..11695 | + | 270 | Protein_13 | hypothetical protein | - |
| QDX02_RS28175 (QDX02_28175) | 11831..12331 | - | 501 | WP_000117637.1 | antirestriction protein ArdA | - |
| QDX02_RS28180 (QDX02_28180) | 12946..13044 | - | 99 | WP_148169729.1 | Hok/Gef family protein | - |
| QDX02_RS28185 (QDX02_28185) | 13007..13090 | - | 84 | Protein_16 | DUF5431 family protein | - |
| QDX02_RS28190 (QDX02_28190) | 13190..13498 | - | 309 | Protein_17 | hypothetical protein | - |
| QDX02_RS28195 (QDX02_28195) | 13585..14236 | + | 652 | Protein_18 | IS66-like element accessory protein TnpA | - |
| QDX02_RS28200 (QDX02_28200) | 14236..14582 | + | 347 | Protein_19 | IS66 family insertion sequence element accessory protein TnpB | - |
| QDX02_RS28205 (QDX02_28205) | 14602..16173 | + | 1572 | WP_032166661.1 | IS66 family transposase IS679 | Transposase |
| QDX02_RS28210 (QDX02_28210) | 16200..16971 | - | 772 | Protein_21 | hypothetical protein | - |
| QDX02_RS28215 (QDX02_28215) | 17017..17484 | - | 468 | WP_235392045.1 | DUF1380 family protein | - |
| QDX02_RS28220 (QDX02_28220) | 17465..17686 | - | 222 | WP_001104868.1 | hypothetical protein | - |
| QDX02_RS28225 (QDX02_28225) | 17687..18370 | - | 684 | WP_000085951.1 | DNA methylase | - |
| QDX02_RS28230 (QDX02_28230) | 18446..18757 | - | 312 | WP_077633986.1 | hypothetical protein | - |
| QDX02_RS28235 (QDX02_28235) | 18761..19183 | - | 423 | WP_000774834.1 | plasmid partitioning/stability family protein | - |
| QDX02_RS28240 (QDX02_28240) | 19186..20166 | - | 981 | WP_001218108.1 | plasmid segregation protein ParM | - |
| QDX02_RS28245 (QDX02_28245) | 20554..22167 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QDX02_RS28250 (QDX02_28250) | 22198..22548 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QDX02_RS28255 (QDX02_28255) | 22545..22970 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QDX02_RS28260 (QDX02_28260) | 23061..23405 | + | 345 | WP_282842699.1 | hypothetical protein | - |
| QDX02_RS28265 (QDX02_28265) | 23480..24688 | - | 1209 | WP_000343732.1 | IS256 family transposase IS1414 | Transposase |
| QDX02_RS28270 (QDX02_28270) | 25193..25348 | - | 156 | Protein_33 | transposase domain-containing protein | - |
| QDX02_RS28275 (QDX02_28275) | 25347..25682 | - | 336 | Protein_34 | IS3 family transposase | - |
| QDX02_RS28280 (QDX02_28280) | 25760..27196 | - | 1437 | WP_000860465.1 | Hemolysin secretion protein D, plasmid | VF |
| QDX02_RS28285 (QDX02_28285) | 27215..29338 | - | 2124 | WP_000376538.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| QDX02_RS28290 (QDX02_28290) | 29410..32484 | - | 3075 | WP_001142368.1 | Hemolysin, plasmid | VF |
| QDX02_RS28295 (QDX02_28295) | 32496..33008 | - | 513 | WP_015675120.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| QDX02_RS28300 (QDX02_28300) | 34063..34332 | - | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | - |
| QDX02_RS28305 (QDX02_28305) | 35194..36225 | - | 1032 | WP_000907883.1 | plasmid replication initiator RepA | - |
| QDX02_RS28310 (QDX02_28310) | 36984..37487 | + | 504 | WP_000206175.1 | transcription termination/antitermination NusG family protein | - |
| QDX02_RS28315 (QDX02_28315) | 37585..38271 | + | 687 | WP_000206190.1 | DUF2913 family protein | - |
| QDX02_RS28320 (QDX02_28320) | 38565..38807 | + | 243 | WP_001245734.1 | hypothetical protein | - |
| QDX02_RS28325 (QDX02_28325) | 38817..39314 | + | 498 | WP_000559317.1 | hypothetical protein | - |
| QDX02_RS28330 (QDX02_28330) | 39314..39784 | + | 471 | WP_000269367.1 | hypothetical protein | VF |
| QDX02_RS28335 (QDX02_28335) | 39811..40236 | + | 426 | WP_000776569.1 | DotD/TraH family lipoprotein | - |
| QDX02_RS28340 (QDX02_28340) | 40233..41015 | + | 783 | WP_000872512.1 | hypothetical protein | VF |
| QDX02_RS28345 (QDX02_28345) | 41021..42193 | + | 1173 | WP_000380306.1 | Twitching mobility protein | VF |
| QDX02_RS28350 (QDX02_28350) | 42186..42446 | + | 261 | WP_000796496.1 | IcmT/TraK family protein | - |
| QDX02_RS28355 (QDX02_28355) | 42464..42619 | + | 156 | WP_282842694.1 | hypothetical protein | - |
| QDX02_RS28360 (QDX02_28360) | 42736..45906 | + | 3171 | WP_282842695.1 | hypothetical protein | - |
| QDX02_RS28365 (QDX02_28365) | 45921..46400 | + | 480 | WP_000853820.1 | hypothetical protein | - |
| QDX02_RS28370 (QDX02_28370) | 46420..47091 | + | 672 | WP_000753819.1 | hypothetical protein | VF |
| QDX02_RS28375 (QDX02_28375) | 47088..48131 | + | 1044 | WP_000199394.1 | DotH/IcmK family type IV secretion protein | - |
| QDX02_RS28380 (QDX02_28380) | 48134..49327 | + | 1194 | WP_000963756.1 | hypothetical protein | VF |
| QDX02_RS28385 (QDX02_28385) | 49328..50038 | + | 711 | WP_000842735.1 | conjugal transfer protein TraP | - |
| QDX02_RS28390 (QDX02_28390) | 50043..50573 | + | 531 | WP_024250743.1 | conjugal transfer protein TraQ | - |
| QDX02_RS28395 (QDX02_28395) | 50605..51012 | + | 408 | WP_001059622.1 | hypothetical protein | - |
| QDX02_RS28400 (QDX02_28400) | 51068..51337 | + | 270 | WP_001024052.1 | hypothetical protein | - |
| QDX02_RS28405 (QDX02_28405) | 51331..51942 | + | 612 | WP_000955158.1 | hypothetical protein | - |
| QDX02_RS28410 (QDX02_28410) | 51946..55002 | + | 3057 | WP_000906733.1 | hypothetical protein | VF |
| QDX02_RS28415 (QDX02_28415) | 55026..56246 | + | 1221 | WP_001039317.1 | conjugal transfer protein TraW | - |
| QDX02_RS28420 (QDX02_28420) | 56243..56773 | + | 531 | WP_000678126.1 | conjugal transfer protein TraX | - |
| QDX02_RS28425 (QDX02_28425) | 56838..57338 | + | 501 | WP_148277502.1 | hypothetical protein | - |
| QDX02_RS28430 (QDX02_28430) | 57340..57684 | + | 345 | WP_000061675.1 | hypothetical protein | - |
| QDX02_RS28435 (QDX02_28435) | 57766..59916 | + | 2151 | WP_000221823.1 | DotA/TraY family protein | - |
| QDX02_RS28440 (QDX02_28440) | 59934..60305 | + | 372 | WP_282842696.1 | hypothetical protein | - |
| QDX02_RS28445 (QDX02_28445) | 60629..60853 | + | 225 | WP_024250740.1 | hemolysin expression modulator Hha | - |
| QDX02_RS28450 (QDX02_28450) | 61113..61469 | + | 357 | WP_000839608.1 | hypothetical protein | - |
| QDX02_RS28455 (QDX02_28455) | 61508..62161 | + | 654 | WP_000090954.1 | DUF5710 domain-containing protein | - |
| QDX02_RS28460 (QDX02_28460) | 62520..62657 | + | 138 | WP_000078925.1 | Hok/Gef family protein | - |
| QDX02_RS28465 (QDX02_28465) | 62945..64318 | + | 1374 | WP_000020269.1 | hypothetical protein | - |
| QDX02_RS28470 (QDX02_28470) | 64328..65248 | + | 921 | WP_001099721.1 | hypothetical protein | - |
| QDX02_RS28475 (QDX02_28475) | 65238..67454 | + | 2217 | WP_282842697.1 | F-type conjugative transfer protein TrbC | - |
| QDX02_RS28480 (QDX02_28480) | 67484..67984 | + | 501 | WP_015675113.1 | Cardiolipin synthase B | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|