MGE detailed information
MGE type: Conjugative plasmid MGE length: 96635 bp
Accession: NZ_CP122717 Location: 1..96635 Organism: Escherichia coli strain ETEC1749 Replicon: plasmid unnamed5
Accession: NZ_CP122717 Location: 1..96635 Organism: Escherichia coli strain ETEC1749 Replicon: plasmid unnamed5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX02_RS27495 (1) | 1..2820 | + | 2820 | WP_001007033.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDX02_RS27500 (2823) | 2823..3134 | - | 312 | WP_000522221.1 | heavy metal-binding domain-containing protein | - |
| QDX02_RS27505 (3349) | 3349..4041 | + | 693 | WP_282842692.1 | hypothetical protein | - |
| QDX02_RS27510 (4362) | 4362..6578 | + | 2217 | Protein_4 | type IV conjugative transfer system coupling protein TraD | - |
| QDX02_RS27515 (6578) | 6578..11848 | + | 5271 | WP_000986925.1 | Multifunctional conjugation protein TraI | Relaxase |
| QDX02_RS27520 (11868) | 11868..12612 | + | 745 | Protein_6 | conjugal transfer pilus acetylase TraX | - |
| QDX02_RS27525 (12667) | 12667..13227 | + | 561 | WP_000139309.1 | fertility inhibition protein FinO | - |
| QDX02_RS27530 (13363) | 13363..13578 | + | 216 | WP_032166857.1 | hypothetical protein | - |
| QDX02_RS27535 (13822) | 13822..13908 | + | 87 | Protein_9 | endonuclease | - |
| QDX02_RS27540 (14089) | 14089..14400 | - | 312 | WP_000765906.1 | hypothetical protein | - |
| - (14696) | 14696..14757 | - | 62 | NuclAT_1 | - | - |
| - (14696) | 14696..14757 | - | 62 | NuclAT_1 | - | - |
| - (14696) | 14696..14757 | - | 62 | NuclAT_1 | - | - |
| - (14696) | 14696..14757 | - | 62 | NuclAT_1 | - | - |
| QDX02_RS27550 (16060) | 16060..16200 | + | 141 | WP_064717426.1 | Hok/Gef family protein | - |
| QDX02_RS27555 (16480) | 16480..16737 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| QDX02_RS27560 (16971) | 16971..17045 | + | 75 | WP_032319616.1 | RepA leader peptide Tap | - |
| QDX02_RS27565 (17038) | 17038..18060 | + | 1023 | WP_000840938.1 | plasmid replication initiator RepA | - |
| QDX02_RS27570 (18976) | 18976..19245 | + | 270 | WP_000079930.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QDX02_RS27575 (19245) | 19245..19523 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QDX02_RS27580 (19569) | 19569..20298 | + | 730 | Protein_18 | 3'-5' exonuclease | - |
| QDX02_RS27585 (20305) | 20305..20613 | - | 309 | Protein_19 | IS3 family transposase IS911 | Transposase |
| QDX02_RS27590 (20630) | 20630..21706 | - | 1077 | WP_000907656.1 | IS110 family transposase ISEc21 | Transposase |
| QDX02_RS27595 (21988) | 21988..22832 | - | 845 | Protein_21 | IS3 family transposase | - |
| QDX02_RS27600 (22959) | 22959..23353 | - | 395 | Protein_22 | ATP-binding protein | - |
| QDX02_RS27605 (23701) | 23701..24075 | - | 375 | WP_015675362.1 | Heat-labile enterotoxin B chain | VF |
| QDX02_RS27610 (24072) | 24072..24848 | - | 777 | WP_042634421.1 | Heat-labile enterotoxin A chain | VF |
| QDX02_RS27615 (25122) | 25122..25326 | - | 205 | Protein_25 | IS110 family transposase | - |
| QDX02_RS27620 (25715) | 25715..26428 | + | 714 | WP_001424997.1 | hypothetical protein | - |
| QDX02_RS27625 (26640) | 26640..27611 | + | 972 | WP_001078349.1 | IS481 family transposase ISEc18 | Transposase |
| QDX02_RS27630 (27703) | 27703..28052 | - | 350 | Protein_28 | integrase core domain-containing protein | - |
| QDX02_RS27635 (28085) | 28085..31051 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QDX02_RS27640 (31055) | 31055..31615 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| QDX02_RS27645 (31925) | 31925..33502 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| QDX02_RS27650 (33693) | 33693..33992 | - | 300 | Protein_32 | IS3 family transposase | - |
| QDX02_RS27655 (34018) | 34018..34597 | + | 580 | Protein_33 | IS256 family transposase | - |
| QDX02_RS27660 (35074) | 35074..35289 | + | 216 | WP_000739296.1 | heat-stable enterotoxin ST-II | - |
| QDX02_RS27665 (35677) | 35677..36520 | + | 844 | Protein_35 | IS3 family transposase | - |
| QDX02_RS27670 (36606) | 36606..37031 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QDX02_RS27675 (37028) | 37028..37378 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QDX02_RS27680 (37409) | 37409..39022 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QDX02_RS27685 (39049) | 39049..39327 | + | 279 | Protein_39 | transposase | - |
| QDX02_RS27690 (39443) | 39443..40978 | - | 1536 | WP_001424993.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| QDX02_RS27695 (41046) | 41046..41147 | - | 102 | Protein_41 | restriction endonuclease subunit M | - |
| QDX02_RS27700 (41305) | 41305..41457 | - | 153 | Protein_42 | transposase | - |
| QDX02_RS27705 (41533) | 41533..42296 | + | 764 | Protein_43 | IS3 family transposase IS2 | Transposase |
| QDX02_RS27710 (42324) | 42324..42991 | - | 668 | Protein_44 | IS3 family transposase ISKpn38 | Transposase |
| QDX02_RS27715 (43069) | 43069..43242 | - | 174 | Protein_45 | IS3 family transposase | - |
| QDX02_RS27720 (43312) | 43312..44435 | + | 1124 | Protein_46 | IS3 family transposase IS3F | Transposase |
| QDX02_RS27725 (44782) | 44782..45105 | - | 324 | WP_230909587.1 | Transcriptional repressor MprA | VF |
| QDX02_RS27730 (45154) | 45154..45282 | - | 129 | Protein_48 | Transcriptional repressor MprA | VF |
| QDX02_RS27735 (45754) | 45754..45996 | - | 243 | WP_050562259.1 | toxin-activating lysine-acyltransferase | - |
| QDX02_RS27740 (46447) | 46447..46556 | + | 110 | Protein_50 | IS5/IS1182 family transposase | - |
| QDX02_RS27745 (47079) | 47079..47329 | + | 251 | Protein_51 | type II toxin-antitoxin system ParD family antitoxin | - |
| QDX02_RS27750 (47316) | 47316..47610 | + | 295 | Protein_52 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDX02_RS27755 (47973) | 47973..48713 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| QDX02_RS27760 (48998) | 48998..49975 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QDX02_RS27765 (50655) | 50655..50900 | - | 246 | Protein_55 | integrase core domain-containing protein | - |
| QDX02_RS27770 (50902) | 50902..51189 | - | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDX02_RS27775 (51186) | 51186..51437 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QDX02_RS27780 (51610) | 51610..51822 | - | 213 | WP_000402944.1 | hypothetical protein | - |
| QDX02_RS27785 (52196) | 52196..53401 | + | 1206 | WP_000817634.1 | Plasmid partition protein A | VF |
| QDX02_RS27790 (53398) | 53398..54360 | + | 963 | WP_000756327.1 | ParB family protein | - |
| QDX02_RS27795 (54594) | 54594..55371 | + | 778 | Protein_61 | transposase DNA-binding-containing protein | - |
| QDX02_RS27800 (55501) | 55501..55584 | - | 84 | Protein_62 | DUF4113 domain-containing protein | - |
| QDX02_RS27805 (55586) | 55586..56114 | + | 529 | Protein_63 | DUF1281 domain-containing protein | - |
| QDX02_RS27810 (56111) | 56111..56422 | + | 312 | WP_001309256.1 | hypothetical protein | - |
| QDX02_RS27815 (56499) | 56499..56570 | + | 72 | Protein_65 | hypothetical protein | - |
| QDX02_RS27820 (56652) | 56652..58352 | - | 1701 | WP_000125555.1 | group II intron reverse transcriptase/maturase | - |
| QDX02_RS27825 (58974) | 58974..59585 | + | 612 | Protein_67 | DNA methylase | - |
| QDX02_RS27830 (59586) | 59586..59807 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| QDX02_RS27835 (59821) | 59821..60255 | + | 435 | WP_000274480.1 | DUF1380 family protein | - |
| QDX02_RS27840 (60306) | 60306..61085 | + | 780 | WP_282842688.1 | hypothetical protein | - |
| QDX02_RS27845 (61502) | 61502..61927 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| QDX02_RS27850 (61974) | 61974..62393 | + | 420 | WP_000271716.1 | DUF1380 family protein | - |
| QDX02_RS27855 (62393) | 62393..62584 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QDX02_RS27860 (62846) | 62846..63496 | + | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| QDX02_RS27865 (63496) | 63496..63843 | + | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| QDX02_RS27870 (63863) | 63863..65434 | + | 1572 | WP_000381443.1 | IS66 family transposase IS679 | Transposase |
| QDX02_RS27875 (65468) | 65468..65866 | - | 399 | Protein_77 | hypothetical protein | - |
| QDX02_RS27880 (66283) | 66283..66513 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QDX02_RS27885 (66565) | 66565..67926 | + | 1362 | WP_000170653.1 | DUF3560 domain-containing protein | - |
| QDX02_RS27890 (67973) | 67973..68536 | + | 564 | WP_001423687.1 | class I SAM-dependent methyltransferase | - |
| QDX02_RS27895 (68622) | 68622..69048 | - | 427 | Protein_81 | hypothetical protein | - |
| QDX02_RS27900 (69118) | 69118..69324 | + | 207 | WP_187771926.1 | single-stranded DNA-binding protein | - |
| QDX02_RS27905 (69350) | 69350..69889 | + | 540 | WP_000290811.1 | single-stranded DNA-binding protein | - |
| QDX02_RS27910 (69951) | 69951..70184 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| QDX02_RS27915 (70248) | 70248..72206 | + | 1959 | WP_000117204.1 | ParB/RepB/Spo0J family partition protein | - |
| QDX02_RS27920 (72261) | 72261..72695 | + | 435 | WP_000845915.1 | conjugation system SOS inhibitor PsiB | - |
| QDX02_RS27925 (72692) | 72692..73478 | + | 787 | Protein_87 | plasmid SOS inhibition protein A | - |
| - (73423) | 73423..73621 | + | 199 | NuclAT_0 | - | - |
| - (73423) | 73423..73621 | + | 199 | NuclAT_0 | - | - |
| - (73423) | 73423..73621 | + | 199 | NuclAT_0 | - | - |
| - (73423) | 73423..73621 | + | 199 | NuclAT_0 | - | - |
| QDX02_RS27930 (73628) | 73628..73777 | + | 150 | Protein_88 | DUF5431 family protein | - |
| QDX02_RS27935 (73719) | 73719..73844 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QDX02_RS27940 (74145) | 74145..74331 | - | 187 | Protein_90 | pilus protein | - |
| QDX02_RS27945 (74391) | 74391..74678 | + | 288 | WP_000107541.1 | hypothetical protein | - |
| QDX02_RS27950 (74796) | 74796..75617 | + | 822 | WP_001424949.1 | DUF932 domain-containing protein | - |
| QDX02_RS27955 (75913) | 75913..76515 | - | 603 | WP_077632063.1 | hypothetical protein | VF |
| QDX02_RS27960 (76837) | 76837..77220 | + | 384 | WP_001151534.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDX02_RS27965 (77411) | 77411..78058 | + | 648 | WP_000332521.1 | conjugal transfer transcriptional regulator TraJ | - |
| QDX02_RS27970 (78194) | 78194..78409 | + | 216 | WP_071782156.1 | conjugal transfer relaxosome protein TraY | - |
| QDX02_RS27975 (78453) | 78453..78818 | + | 366 | WP_000338819.1 | type IV conjugative transfer system pilin TraA | - |
| QDX02_RS27980 (78833) | 78833..79144 | + | 312 | WP_000012125.1 | type IV conjugative transfer system protein TraL | - |
| QDX02_RS27985 (79166) | 79166..79732 | + | 567 | WP_064986971.1 | type IV conjugative transfer system protein TraE | - |
| QDX02_RS27990 (79719) | 79719..80447 | + | 729 | WP_001230776.1 | type-F conjugative transfer system secretin TraK | - |
| QDX02_RS27995 (80447) | 80447..81895 | + | 1449 | WP_282842689.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDX02_RS28000 (81885) | 81885..82469 | + | 585 | WP_001423675.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QDX02_RS28005 (82456) | 82456..82653 | + | 198 | WP_001423674.1 | conjugal transfer protein TrbD | - |
| QDX02_RS28010 (82665) | 82665..82916 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| QDX02_RS28015 (82913) | 82913..83428 | + | 516 | WP_000809905.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDX02_RS28020 (83563) | 83563..83784 | + | 222 | WP_001278685.1 | conjugal transfer protein TraR | - |
| QDX02_RS28025 (83944) | 83944..86571 | + | 2628 | WP_001064261.1 | type IV secretion system protein TraC | - |
| QDX02_RS28030 (86568) | 86568..86954 | + | 387 | WP_000214057.1 | type-F conjugative transfer system protein TrbI | - |
| QDX02_RS28035 (86951) | 86951..87583 | + | 633 | WP_001203748.1 | type-F conjugative transfer system protein TraW | - |
| QDX02_RS28040 (87580) | 87580..88572 | + | 993 | WP_282842691.1 | conjugal transfer pilus assembly protein TraU | - |
| QDX02_RS28045 (88598) | 88598..89061 | + | 464 | Protein_111 | ATP-binding protein | - |
| QDX02_RS28050 (89072) | 89072..89386 | + | 315 | WP_001423717.1 | hypothetical protein | - |
| QDX02_RS28055 (89379) | 89379..89831 | + | 453 | WP_001385157.1 | hypothetical protein | - |
| QDX02_RS28060 (89859) | 89859..90497 | + | 639 | WP_001104087.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDX02_RS28065 (90494) | 90494..92302 | + | 1809 | WP_000821839.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDX02_RS28070 (92329) | 92329..92586 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| QDX02_RS28075 (92579) | 92579..93322 | + | 744 | WP_001030375.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDX02_RS28080 (93338) | 93338..93685 | + | 348 | WP_001287903.1 | conjugal transfer protein TrbA | - |
| QDX02_RS28085 (93804) | 93804..94088 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDX02_RS28090 (94075) | 94075..94629 | + | 555 | WP_000052621.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDX02_RS28095 (94619) | 94619..94933 | + | 315 | WP_001385158.1 | P-type conjugative transfer protein TrbJ | - |
| QDX02_RS28100 (94887) | 94887..95279 | + | 393 | WP_000126336.1 | F-type conjugal transfer protein TrbF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|