MGE detailed information
MGE type: Prophage MGE length: 38666 bp
Accession: NZ_CP122600 Location: 2115397..2154062 Organism: Escherichia coli strain ETEC6333 Replicon: chromosome
Accession: NZ_CP122600 Location: 2115397..2154062 Organism: Escherichia coli strain ETEC6333 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX83_RS10240 () | 2110662..2111402 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| QDX83_RS10245 () | 2111437..2111958 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| QDX83_RS10250 () | 2111960..2112562 | - | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| QDX83_RS10255 () | 2112633..2112698 | + | 66 | WP_072093883.1 | stress response small protein YobI | - |
| QDX83_RS10260 () | 2112837..2113448 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| QDX83_RS10265 () | 2113457..2114467 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| QDX83_RS10270 () | 2114615..2115400 | - | 786 | WP_000571471.1 | zinc ABC transporter permease subunit ZnuB | - |
| QDX83_RS10275 () | 2115397..2116152 | - | 756 | WP_000202996.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| QDX83_RS10280 () | 2116231..2117163 | + | 933 | WP_001376899.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| QDX83_RS10285 () | 2117179..2118501 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| QDX83_RS10290 () | 2118621..2119592 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| QDX83_RS10295 () | 2119724..2121166 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| QDX83_RS10300 () | 2121294..2122163 | - | 870 | WP_032353151.1 | DNA-binding transcriptional regulator HexR | - |
| QDX83_RS10305 () | 2122501..2123976 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| QDX83_RS10310 () | 2124230..2124688 | + | 459 | WP_025210499.1 | IS200-IS605 family transposase IS200C | Transposase |
| QDX83_RS10315 () | 2124922..2126733 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| QDX83_RS10320 () | 2126770..2127411 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QDX83_RS10325 () | 2127466..2128644 | - | 1179 | WP_021517157.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QDX83_RS10330 () | 2128778..2129068 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| QDX83_RS10335 () | 2129135..2129491 | + | 357 | WP_063086341.1 | protein YebF | - |
| QDX83_RS10340 () | 2129818..2130477 | + | 660 | WP_063086343.1 | tellurite resistance TerB family protein | - |
| QDX83_RS10345 () | 2130641..2131810 | - | 1170 | WP_000942662.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QDX83_RS10350 () | 2131867..2132292 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QDX83_RS10355 () | 2132449..2134509 | + | 2061 | WP_063086345.1 | oligopeptidase B | - |
| QDX83_RS10360 () | 2134506..2135168 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| QDX83_RS10365 () | 2135192..2135848 | - | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein YobB | - |
| QDX83_RS10370 () | 2135950..2136180 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| QDX83_RS10375 () | 2136319..2136693 | + | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| QDX83_RS10380 () | 2136697..2137569 | + | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| QDX83_RS10385 () | 2137582..2137923 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 2137951..2138222 | - | 272 | - | - | Antitoxin Detail |
| - | 2138081..2138184 | + | 104 | - | - | Toxin Detail |
| QDX83_RS10390 () | 2138319..2138975 | + | 657 | WP_001520704.1 | protein-serine/threonine phosphatase | - |
| QDX83_RS10395 () | 2138976..2139167 | - | 192 | WP_001296140.1 | YebW family protein | - |
| QDX83_RS10400 () | 2139272..2139508 | - | 237 | WP_001295499.1 | YebV family protein | - |
| QDX83_RS10405 () | 2139626..2141065 | - | 1440 | WP_024166480.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QDX83_RS10410 () | 2141145..2143778 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| QDX83_RS10415 () | 2143747..2145030 | - | 1284 | WP_025210564.1 | membrane integrity lipid transport subunit YebS | - |
| QDX83_RS10420 () | 2145160..2145657 | + | 498 | WP_001043884.1 | L-methionine (R)-S-oxide reductase | - |
| QDX83_RS10425 () | 2145754..2146452 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| QDX83_RS10430 () | 2146472..2148520 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| QDX83_RS10435 () | 2148712..2149593 | + | 882 | WP_000984517.1 | protease HtpX | - |
| QDX83_RS10440 () | 2149639..2151012 | - | 1374 | WP_001354729.1 | MFS transporter | - |
| QDX83_RS10445 () | 2151189..2151980 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| QDX83_RS10450 () | 2152124..2152363 | - | 240 | WP_001211011.1 | YobH family protein | - |
| QDX83_RS10455 () | 2152522..2152665 | + | 144 | WP_063086347.1 | PhoP/PhoQ regulator MgrB | - |
| QDX83_RS10460 () | 2152740..2153027 | + | 288 | WP_001006866.1 | YebO family protein | - |
| QDX83_RS10465 () | 2153697..2153840 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| QDX83_RS10470 () | 2153853..2154062 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| QDX83_RS10475 () | 2154228..2155037 | + | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| QDX83_RS10480 () | 2155034..2155600 | - | 567 | WP_001306762.1 | manganese efflux pump MntP | - |
| QDX83_RS10485 () | 2156029..2156487 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| QDX83_RS10490 () | 2156542..2157393 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| QDX83_RS10495 () | 2157406..2158206 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|