MGE detailed information
MGE type: Genomic_island MGE length: 45652 bp
Accession: NZ_CP121189 Location: 3810494..3856145 Organism: Salmonella enterica subsp. enterica serovar Indiana strain S1467 Replicon: chromosome
Accession: NZ_CP121189 Location: 3810494..3856145 Organism: Salmonella enterica subsp. enterica serovar Indiana strain S1467 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P6164_RS18755 () | 3806065..3808509 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| P6164_RS18760 () | 3808618..3809385 | + | 768 | WP_023226791.1 | amidohydrolase | - |
| P6164_RS18765 () | 3809756..3810163 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| P6164_RS18770 () | 3810494..3811213 | + | 720 | WP_023226792.1 | Outer membrane protein PagN | VF |
| P6164_RS18775 () | 3811217..3811405 | - | 189 | WP_031603649.1 | hypothetical protein | - |
| P6164_RS18780 () | 3811441..3811574 | + | 134 | Protein_3680 | transposase | - |
| P6164_RS18785 () | 3812176..3812793 | - | 618 | WP_133467700.1 | protein TioA | - |
| P6164_RS18790 () | 3812933..3813388 | - | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| P6164_RS18795 () | 3813521..3814567 | - | 1047 | WP_223228889.1 | CfaE/CblD family pilus tip adhesin | - |
| P6164_RS18800 () | 3814602..3817289 | - | 2688 | WP_023226795.1 | hypothetical protein | VF |
| P6164_RS18805 () | 3817398..3817916 | - | 519 | WP_001056552.1 | CFA/I fimbrial subunit B | VF |
| P6164_RS18810 () | 3818024..3818734 | - | 711 | WP_001009507.1 | hypothetical protein | VF |
| P6164_RS18815 () | 3819641..3820325 | + | 685 | Protein_3687 | IS21 family transposase ISEc62 | Transposase |
| P6164_RS18820 () | 3820365..3820551 | - | 187 | Protein_3688 | IS3 family transposase IS1351 | Transposase |
| P6164_RS18825 () | 3820632..3820751 | - | 120 | Protein_3689 | hypothetical protein | - |
| P6164_RS18830 () | 3820871..3821818 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| P6164_RS18835 () | 3822312..3822552 | - | 241 | Protein_3691 | PerC family transcriptional regulator | - |
| P6164_RS18840 () | 3822635..3823456 | - | 822 | WP_023209688.1 | polysaccharide deacetylase family protein | - |
| P6164_RS18845 () | 3823864..3824334 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| P6164_RS18850 () | 3824356..3826866 | - | 2511 | WP_053505593.1 | F1 capsule-anchoring protein | VF |
| P6164_RS18855 () | 3826890..3827630 | - | 741 | WP_051129375.1 | Chaperone protein caf1M | VF |
| P6164_RS18860 () | 3827705..3828202 | - | 498 | WP_051129374.1 | Saf-pilin pilus formation protein SafA | - |
| P6164_RS18865 () | 3828335..3828829 | - | 495 | WP_051129373.1 | hypothetical protein | - |
| P6164_RS18870 () | 3829597..3830143 | - | 547 | Protein_3698 | IS3 family transposase IS1351 | Transposase |
| P6164_RS18875 () | 3830234..3831462 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| P6164_RS18880 () | 3831488..3831634 | - | 147 | Protein_3700 | IS3 family transposase IS1351 | Transposase |
| P6164_RS18885 () | 3831698..3831949 | + | 252 | WP_131166435.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 3831714..3831939 | - | 226 | - | - | Antitoxin Detail |
| P6164_RS18890 () | 3831995..3832459 | - | 465 | WP_127201574.1 | hypothetical protein | - |
| P6164_RS18895 () | 3832840..3833685 | - | 846 | Protein_3703 | hypothetical protein | VF |
| P6164_RS18900 () | 3833705..3833842 | + | 138 | WP_023227287.1 | hypothetical protein | - |
| P6164_RS18905 () | 3833985..3834593 | - | 609 | WP_053505599.1 | hypothetical protein | - |
| P6164_RS18910 () | 3834594..3838718 | - | 4125 | WP_023227779.1 | RHS repeat-associated core domain-containing protein | - |
| P6164_RS18915 () | 3838737..3839183 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| P6164_RS18920 () | 3839207..3841396 | - | 2190 | WP_023227778.1 | hypothetical protein | VF |
| P6164_RS18925 () | 3841793..3842314 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| P6164_RS18930 () | 3842338..3842754 | - | 417 | WP_023227777.1 | DUF2195 family protein | - |
| P6164_RS18935 () | 3842751..3842845 | - | 95 | Protein_3711 | cytoplasmic protein | - |
| P6164_RS18940 () | 3842881..3843342 | - | 462 | WP_001668725.1 | hypothetical protein | - |
| P6164_RS18945 () | 3843327..3843797 | - | 471 | WP_023227776.1 | glucosaminidase domain-containing protein | - |
| P6164_RS18950 () | 3843840..3844607 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| P6164_RS18955 () | 3844607..3848476 | - | 3870 | WP_023227775.1 | hypothetical protein | VF |
| P6164_RS18960 () | 3848510..3848941 | - | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| P6164_RS18965 () | 3849143..3849916 | - | 774 | WP_023227774.1 | Rap1a/Tai family immunity protein | - |
| P6164_RS18970 () | 3849921..3851225 | - | 1305 | WP_000132483.1 | Peptidoglycan-associated lipoprotein | VF |
| P6164_RS18975 () | 3851222..3852565 | - | 1344 | WP_023227773.1 | hypothetical protein | VF |
| P6164_RS18980 () | 3852569..3853105 | - | 537 | WP_023227772.1 | hypothetical protein | VF |
| P6164_RS18985 () | 3853172..3853657 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| P6164_RS18990 () | 3853800..3854183 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| P6164_RS18995 () | 3854168..3854653 | - | 486 | WP_001081544.1 | type VI secretion system amidase effector protein Tae4 | - |
| P6164_RS19000 () | 3854696..3854890 | - | 195 | Protein_3724 | type VI secretion system lipoprotein TssJ | - |
| P6164_RS19005 () | 3854958..3855443 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| P6164_RS19010 () | 3855699..3856031 | - | 333 | WP_077907151.1 | hypothetical protein | - |
| P6164_RS19015 () | 3856158..3856268 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| P6164_RS19020 () | 3856331..3857839 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| P6164_RS19025 () | 3857863..3858408 | - | 546 | WP_023227770.1 | type VI secretion system contractile sheath small subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|