MGE detailed information
MGE type: Prophage MGE length: 45556 bp
Accession: NZ_CP120393 Location: 2750257..2795812 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 1698-2017_CO_06 Replicon: chromosome
Accession: NZ_CP120393 Location: 2750257..2795812 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 1698-2017_CO_06 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVA83_RS13755 (PVA83_13755) | 2745695..2747067 | + | 1373 | Protein_2695 | MFS transporter | - |
| PVA83_RS13760 (PVA83_13760) | 2747115..2747996 | - | 882 | WP_000984498.1 | protease HtpX | - |
| PVA83_RS13765 (PVA83_13765) | 2748189..2750237 | - | 2049 | WP_001091235.1 | carboxy terminal-processing peptidase | - |
| PVA83_RS13770 (PVA83_13770) | 2750257..2750943 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| PVA83_RS13775 (PVA83_13775) | 2751041..2751538 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| PVA83_RS13780 (PVA83_13780) | 2751667..2752950 | + | 1284 | WP_001207300.1 | membrane integrity lipid transport subunit YebS | - |
| PVA83_RS13785 (PVA83_13785) | 2752919..2755552 | + | 2634 | WP_001521100.1 | Intermembrane transport protein YebT | VF |
| PVA83_RS13790 (PVA83_13790) | 2755630..2757069 | + | 1440 | WP_031624927.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PVA83_RS13795 (PVA83_13795) | 2757187..2757423 | + | 237 | WP_024131167.1 | YebV family protein | - |
| PVA83_RS13800 (PVA83_13800) | 2757534..2757725 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| PVA83_RS13805 (PVA83_13805) | 2757744..2758394 | - | 651 | WP_000986169.1 | protein-serine/threonine phosphatase | - |
| PVA83_RS13810 (PVA83_13810) | 2758618..2758782 | - | 165 | WP_001134857.1 | hypothetical protein | - |
| PVA83_RS13815 (PVA83_13815) | 2759067..2759788 | - | 722 | Protein_2707 | Guanine nucleotide exchange factor sopE2 | VF |
| PVA83_RS13820 (PVA83_13820) | 2760472..2760867 | + | 396 | WP_000422884.1 | DUF1398 domain-containing protein | - |
| PVA83_RS13825 (PVA83_13825) | 2761196..2761672 | + | 477 | WP_000030950.1 | hypothetical protein | - |
| PVA83_RS13830 (PVA83_13830) | 2762060..2762479 | - | 420 | WP_000354403.1 | GNAT family N-acetyltransferase | - |
| PVA83_RS13835 (PVA83_13835) | 2762850..2763116 | + | 267 | WP_010989185.1 | hypothetical protein | - |
| PVA83_RS13840 (PVA83_13840) | 2763285..2763425 | + | 141 | WP_031624337.1 | hypothetical protein | - |
| PVA83_RS13845 (PVA83_13845) | 2763401..2764671 | - | 1271 | Protein_2713 | IS256 family transposase ISEc39 | Transposase |
| PVA83_RS13850 (PVA83_13850) | 2764741..2765162 | + | 422 | Protein_2714 | tyrosine-type recombinase/integrase | - |
| PVA83_RS13855 (PVA83_13855) | 2766461..2767375 | + | 915 | WP_001233444.1 | DMT family transporter | - |
| PVA83_RS13860 (PVA83_13860) | 2767508..2767666 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PVA83_RS13865 (PVA83_13865) | 2767676..2768290 | + | 615 | WP_000848063.1 | disulfide bond formation protein B | - |
| PVA83_RS13870 (PVA83_13870) | 2768699..2770678 | - | 1980 | WP_001237518.1 | alkyl sulfatase dimerization domain-containing protein | - |
| PVA83_RS13875 (PVA83_13875) | 2771074..2772204 | + | 1131 | WP_000529513.1 | GGDEF domain-containing protein | - |
| PVA83_RS13880 (PVA83_13880) | 2772490..2772885 | - | 396 | Protein_2720 | DUF977 family protein | - |
| PVA83_RS13885 (PVA83_13885) | 2772898..2773008 | - | 111 | Protein_2721 | replication protein | - |
| PVA83_RS13890 (PVA83_13890) | 2773009..2773370 | + | 362 | Protein_2722 | recombinase RecT | - |
| PVA83_RS13895 (PVA83_13895) | 2773369..2773677 | + | 309 | Protein_2723 | hypothetical protein ; Integrase | Integrase |
| - | 2773796..2773939 | + | 144 | - | - | Antitoxin Detail |
| - | 2773798..2773900 | - | 103 | - | - | Toxin Detail |
| PVA83_RS13900 (PVA83_13900) | 2774041..2774394 | - | 354 | WP_000722366.1 | YebY family protein | - |
| PVA83_RS13905 (PVA83_13905) | 2774411..2775286 | - | 876 | WP_000979693.1 | copper homeostasis membrane protein CopD | - |
| PVA83_RS13910 (PVA83_13910) | 2775287..2775661 | - | 375 | WP_001681742.1 | CopC domain-containing protein YobA | - |
| PVA83_RS13915 (PVA83_13915) | 2775799..2776029 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PVA83_RS13920 (PVA83_13920) | 2776137..2776793 | + | 657 | WP_000100250.1 | carbon-nitrogen hydrolase family protein | - |
| PVA83_RS13925 (PVA83_13925) | 2776817..2777515 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| PVA83_RS13930 (PVA83_13930) | 2777552..2779603 | - | 2052 | WP_000936997.1 | oligopeptidase B | - |
| PVA83_RS13935 (PVA83_13935) | 2779817..2780476 | - | 660 | WP_000024713.1 | tellurite resistance TerB family protein | - |
| PVA83_RS13940 (PVA83_13940) | 2780570..2780923 | - | 354 | WP_001042123.1 | protein YebF | - |
| PVA83_RS13945 (PVA83_13945) | 2780991..2781281 | - | 291 | WP_000257728.1 | DNA damage-inducible protein YebG | - |
| PVA83_RS13950 (PVA83_13950) | 2781412..2782590 | + | 1179 | WP_000173426.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PVA83_RS13955 (PVA83_13955) | 2782690..2783331 | - | 642 | WP_000800493.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PVA83_RS13960 (PVA83_13960) | 2783369..2785180 | - | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| PVA83_RS13965 (PVA83_13965) | 2785415..2786890 | - | 1476 | WP_000301712.1 | glucose-6-phosphate dehydrogenase | - |
| PVA83_RS13970 (PVA83_13970) | 2787232..2788101 | + | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| PVA83_RS13975 (PVA83_13975) | 2788225..2789667 | + | 1443 | WP_031624930.1 | pyruvate kinase | - |
| PVA83_RS13980 (PVA83_13980) | 2789740..2790711 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| PVA83_RS13985 (PVA83_13985) | 2790828..2792147 | - | 1320 | WP_001184019.1 | murein DD-endopeptidase MepM | - |
| PVA83_RS13990 (PVA83_13990) | 2792163..2793107 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PVA83_RS13995 (PVA83_13995) | 2793186..2793941 | + | 756 | WP_000203015.1 | Zinc import ATP-binding protein ZnuC | VF |
| PVA83_RS14000 (PVA83_14000) | 2793938..2794723 | + | 786 | WP_000571518.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| PVA83_RS14005 (PVA83_14005) | 2794802..2795812 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| PVA83_RS14010 (PVA83_14010) | 2795821..2796432 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| PVA83_RS14015 (PVA83_14015) | 2796792..2797484 | - | 693 | WP_000227314.1 | hypothetical protein | - |
| PVA83_RS14020 (PVA83_14020) | 2797694..2798293 | + | 600 | WP_000716741.1 | YebB family permuted papain-like enzyme | - |
| PVA83_RS14025 (PVA83_14025) | 2798295..2798816 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| PVA83_RS14030 (PVA83_14030) | 2798853..2799593 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| PVA83_RS14035 (PVA83_14035) | 2799623..2800075 | - | 453 | WP_000653696.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|