MGE detailed information
MGE type: Prophage MGE length: 25386 bp
Accession: NZ_CP119980 Location: 2467593..2492978 Organism: Salmonella enterica strain CRIN525628 Replicon: chromosome
Accession: NZ_CP119980 Location: 2467593..2492978 Organism: Salmonella enterica strain CRIN525628 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P2V98_RS11940 () | 2463106..2463603 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| P2V98_RS11945 () | 2463732..2465015 | + | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| P2V98_RS11950 () | 2464984..2467617 | + | 2634 | WP_001529852.1 | PqiB family protein | - |
| P2V98_RS11955 () | 2467695..2469134 | + | 1440 | WP_023993322.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| P2V98_RS11960 () | 2469252..2469488 | + | 237 | WP_024131167.1 | YebV family protein | - |
| P2V98_RS11965 () | 2469599..2469790 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| P2V98_RS11970 () | 2469809..2470459 | - | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| P2V98_RS11975 () | 2470684..2470848 | - | 165 | WP_001134857.1 | hypothetical protein | - |
| P2V98_RS11980 () | 2471133..2471855 | - | 723 | WP_000182074.1 | Guanine nucleotide exchange factor sopE2 | VF |
| P2V98_RS11985 () | 2472539..2472934 | + | 396 | WP_000422890.1 | DUF1398 domain-containing protein | - |
| P2V98_RS11990 () | 2473264..2473740 | + | 477 | WP_023218584.1 | hypothetical protein | - |
| P2V98_RS11995 () | 2474127..2474546 | - | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| P2V98_RS12000 () | 2474919..2475188 | + | 270 | WP_012664556.1 | hypothetical protein | - |
| P2V98_RS12005 () | 2475354..2475494 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| P2V98_RS12010 () | 2475640..2476848 | - | 1209 | WP_023993323.1 | IS256 family transposase ISEc39 | Transposase |
| P2V98_RS12015 () | 2476918..2477341 | + | 424 | Protein_2344 | tyrosine-type recombinase/integrase | - |
| P2V98_RS12020 () | 2478631..2479545 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| P2V98_RS12025 () | 2479678..2479836 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| P2V98_RS12030 () | 2479846..2480460 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| P2V98_RS12035 () | 2480787..2480954 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| P2V98_RS12040 () | 2480948..2481094 | + | 147 | WP_001520350.1 | hypothetical protein | - |
| P2V98_RS12045 () | 2481608..2481733 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| P2V98_RS12050 () | 2481733..2481913 | + | 181 | Protein_2351 | IS3 family transposase | - |
| P2V98_RS12055 () | 2482303..2482503 | + | 201 | Protein_2352 | PagK family vesicle-borne virulence factor | - |
| P2V98_RS12060 () | 2482600..2483111 | - | 512 | Protein_2353 | tail fiber assembly protein | - |
| P2V98_RS12065 () | 2483124..2483411 | - | 288 | Protein_2354 | macro domain-containing protein | - |
| P2V98_RS12070 () | 2483421..2483636 | - | 216 | Protein_2355 | shikimate transporter | - |
| P2V98_RS12075 () | 2483638..2483898 | - | 261 | Protein_2356 | DUF1441 family protein | - |
| P2V98_RS12080 () | 2484206..2484373 | + | 168 | WP_000789529.1 | lytic enzyme | - |
| P2V98_RS12085 () | 2484630..2485163 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| P2V98_RS12090 () | 2485217..2485408 | - | 192 | Protein_2359 | glycoside hydrolase family 19 protein | - |
| P2V98_RS12095 () | 2485397..2485858 | + | 462 | Protein_2360 | DNA breaking-rejoining protein | - |
| P2V98_RS12100 () | 2486122..2487015 | + | 894 | Protein_2361 | hypothetical protein ; Integrase | Integrase |
| - | 2487173..2487316 | + | 144 | - | - | Antitoxin Detail |
| - | 2487175..2487278 | - | 104 | - | - | Toxin Detail |
| P2V98_RS12105 () | 2487418..2487771 | - | 354 | WP_000722368.1 | YebY family protein | - |
| P2V98_RS12110 () | 2487788..2488663 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| P2V98_RS12115 () | 2488664..2489038 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| P2V98_RS12120 () | 2489176..2489406 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| P2V98_RS12125 () | 2489514..2490170 | + | 657 | WP_000100256.1 | nitrilase-related carbon-nitrogen hydrolase | - |
| P2V98_RS12130 () | 2490194..2490892 | + | 699 | WP_000944278.1 | exodeoxyribonuclease X | - |
| P2V98_RS12135 () | 2490927..2492978 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| P2V98_RS12140 () | 2493192..2493851 | - | 660 | WP_023993328.1 | tellurite resistance TerB family protein | - |
| P2V98_RS12145 () | 2493945..2494298 | - | 354 | WP_001042123.1 | protein YebF | - |
| P2V98_RS12150 () | 2494366..2494656 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| P2V98_RS12155 () | 2494787..2495965 | + | 1179 | WP_000173429.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| P2V98_RS12160 () | 2496065..2496706 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|