MGE detailed information
MGE type: Genomic_island MGE length: 12167 bp
Accession: NZ_CP119773 Location: 2034896..2047062 Organism: Dickeya fangzhongdai strain ZXC1 Replicon: chromosome
Accession: NZ_CP119773 Location: 2034896..2047062 Organism: Dickeya fangzhongdai strain ZXC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQ617_RS09180 (PQ617_09180) | 2031532..2032383 | + | 852 | WP_276219290.1 | hypothetical protein | - |
| PQ617_RS09185 (PQ617_09185) | 2032629..2033501 | - | 873 | WP_276219625.1 | HNH endonuclease | - |
| PQ617_RS09190 (PQ617_09190) | 2033913..2034488 | - | 576 | WP_276219292.1 | hypothetical protein | - |
| PQ617_RS09195 (PQ617_09195) | 2034563..2034775 | - | 213 | WP_276219294.1 | AlpA family phage regulatory protein | - |
| PQ617_RS09200 (PQ617_09200) | 2034896..2035525 | - | 630 | WP_276219295.1 | inovirus Gp2 family protein | - |
| PQ617_RS09205 (PQ617_09205) | 2036353..2037180 | + | 828 | WP_276219296.1 | ribbon-helix-helix domain-containing protein | - |
| PQ617_RS09210 (PQ617_09210) | 2037319..2038185 | + | 867 | WP_276219298.1 | GTPase family protein | - |
| PQ617_RS09215 (PQ617_09215) | 2038282..2039103 | + | 822 | WP_276219300.1 | DUF932 domain-containing protein | - |
| PQ617_RS09220 (PQ617_09220) | 2039134..2039607 | + | 474 | WP_012768688.1 | DNA repair protein RadC | - |
| PQ617_RS09225 (PQ617_09225) | 2039671..2040021 | + | 351 | WP_276219302.1 | TA system toxin CbtA family protein | - |
| PQ617_RS09230 (PQ617_09230) | 2040122..2040655 | + | 534 | WP_276219304.1 | hypothetical protein | - |
| PQ617_RS09235 (PQ617_09235) | 2040717..2040947 | + | 231 | WP_033576634.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PQ617_RS09240 (PQ617_09240) | 2040947..2041351 | + | 405 | WP_033576633.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQ617_RS09245 (PQ617_09245) | 2041432..2041875 | + | 444 | WP_276219306.1 | DUF6088 family protein | Antitoxin Detail |
| PQ617_RS09250 (PQ617_09250) | 2041964..2042764 | + | 801 | WP_276219308.1 | helix-turn-helix transcriptional regulator | - |
| PQ617_RS09255 (PQ617_09255) | 2042987..2043232 | - | 246 | WP_276219310.1 | hypothetical protein | - |
| PQ617_RS09265 (PQ617_09265) | 2044484..2044918 | - | 435 | WP_276219313.1 | methyltransferase domain-containing protein | - |
| PQ617_RS09270 (PQ617_09270) | 2044929..2045186 | - | 258 | WP_276219315.1 | YjhX family toxin | - |
| PQ617_RS09275 (PQ617_09275) | 2045638..2045976 | - | 339 | WP_049855263.1 | hypothetical protein | - |
| PQ617_RS09280 (PQ617_09280) | 2046364..2047083 | - | 720 | WP_276219316.1 | hypothetical protein | - |
| PQ617_RS09285 (PQ617_09285) | 2047809..2048414 | - | 606 | WP_145958394.1 | hypothetical protein | - |
| PQ617_RS09290 (PQ617_09290) | 2048695..2049498 | + | 804 | WP_276219318.1 | hypothetical protein | - |
| PQ617_RS09295 (PQ617_09295) | 2049861..2050706 | + | 846 | WP_100848782.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| PQ617_RS09300 (PQ617_09300) | 2050706..2051686 | + | 981 | WP_049842615.1 | substrate-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|